RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 LCA5Q86VQ0 697 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 CCDC71Q8IV32 467 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 IFT20Q8IY31 132 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 CEP112Q8N8E3 955 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 C17orf47Q8NEP4 570 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 OR10Q1Q8NGQ4 319 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 DIO2Q92813 273 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 ADIPOR1Q96A54 375 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 TTYH2Q9BSA4 534 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 DOHHQ9BU89 302 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 ZNF703Q9H7S9 590 aaPredicted RBP16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 FARSBQ9NSD9 589 aaKnown RBP16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 B4GALT7Q9UBV7 327 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 CES1P1Q9UKY3 287 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 PSME2Q9UL46 239 aa16.17■□□□□ 0.18
PDLIM2-208ENST00000416159 FREM3P0C091 2139 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 HCFC1P51610 2035 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 GOLGA6L10A6NI86 522 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 LRRC3CA6NJW4 275 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 FAM90A27PA6NNH2 459 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 FOXO6A8MYZ6 492 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 SUPT7LO94864 414 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 TOXO94900 526 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 OR4F21O95013 312 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 KRT6AP02538 564 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 KRT6BP04259 564 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 HSD3B1P14060 373 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 GABRA1P14867 456 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 CAPN3P20807 821 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 HSD3B2P26439 372 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 KRT6CP48668 564 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 TRA2BP62995 288 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 RPP38P78345 283 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 GALNT1Q10472 559 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 RPS6KA2Q15349 733 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 SLC48A1Q6P1K1 146 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 CNPY4Q8N129 248 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 KIF18AQ8NI77 898 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 SPPL2AQ8TCT8 520 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 TM4SF18Q96CE8 201 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 JSRP1Q96MG2 331 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 SECISBP2Q96T21 854 aaKnown RBP16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 FAIM2Q9BWQ8 316 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 UCK2Q9BZX2 261 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 TMEM216Q9P0N5 145 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 ZNF225Q9UK10 706 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 CFL2Q9Y281 166 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 PCDHGB3Q9Y5G1 929 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 FAM215AQ9Y5M1 114 aa16.16■□□□□ 0.18
PDLIM2-208ENST00000416159 NKX2-6A6NCS4 301 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 TRIM3O75382 744 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 ERAL1O75616 437 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 SNX4O95219 450 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 GLI4P10075 376 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 IGFBP2P18065 325 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 CSNK2A2P19784 350 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 S1PR1P21453 382 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 GCAP28676 217 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 ZFP36L2P47974 494 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 FBXW4P57775 412 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 TLE4Q04727 773 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 TFF3Q07654 80 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 MAP4K2Q12851 820 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 RASA2Q15283 850 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 UNC50Q53HI1 259 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 ZNF678Q5SXM1 525 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 C1orf185Q5T7R7 199 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 RTL6Q6ICC9 239 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 TMEM64Q6YI46 380 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 LIX1Q8N485 282 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 NEIL3Q8TAT5 605 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 ZNF597Q96LX8 424 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 ALKBH4Q9NXW9 302 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 SPRR3Q9UBC9 169 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 TNFRSF10DQ9UBN6 386 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 VPS29Q9UBQ0 182 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 LRBAP50851 2863 aa16.15■□□□□ 0.18
PDLIM2-208ENST00000416159 NCKAP5O14513 1909 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 FAM47E-STBD1D6RA91 191 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 MANBAO00462 879 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 RIPK2O43353 540 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 DLX3O60479 287 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 LRATO95237 230 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 ATP1B1P05026 303 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 NAGAP17050 411 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 KRT15P19012 456 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 IMPDH1P20839 514 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 ENDOUP21128 410 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 ATP5F1P24539 256 aaPredicted RBP16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 PRICKLE4Q2TBC4 344 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 SLC22A9Q8IVM8 553 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 VWA5B2Q8N398 1253 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 C1orf52Q8N6N3 182 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 CDYL2Q8N8U2 506 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 ACMSDQ8TDX5 336 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 ZNF382Q96SR6 550 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 ANGPTL4Q9BY76 406 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 BRINP2Q9C0B6 783 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 MCCC2Q9HCC0 563 aa16.14■□□□□ 0.17
PDLIM2-208ENST00000416159 STK38LQ9Y2H1 464 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms