RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 FTH1P19P0C7X4 201 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 ZNF28P17035 718 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 RPL3P39023 403 aaKnown RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 AVPR1BP47901 424 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 HBA1P69905 142 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 MOGQ16653 247 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 NANOGP8Q6NSW7 305 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 RHBDD2Q6NTF9 364 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 CLEC4FQ8N1N0 589 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 AURKBQ96GD4 344 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 PANX1Q96RD7 426 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 CMKLR1Q99788 373 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 NPLQ9BXD5 320 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 SLC35C2Q9NQQ7 365 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 ATAD3AQ9NVI7 634 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 MS4A12Q9NXJ0 267 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 EHD3Q9NZN3 535 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 CDC14AQ9UNH5 594 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 MAPRE3Q9UPY8 281 aa14.59□□□□□ -0.07
SHMT2-202ENST00000414700 GPC6Q9Y625 555 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-202ENST00000414700 H0YIG0 161 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 H3BMQ9 156 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 TBX19O60806 448 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 CPSF4O95639 269 aaKnown RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 MT-CO3P00414 261 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 FGF5P12034 268 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 DCKP27707 260 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 FEN1P39748 380 aaKnown RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 PCBP4P57723 403 aaKnown RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 RAB38P57729 211 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 FOXL2P58012 376 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 ATP1A4Q13733 1029 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF362Q5T0B9 420 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF551Q7Z340 670 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 MARCH9Q86YJ5 346 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 RNF148Q8N7C7 305 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 OR51Q1Q8NH59 317 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 COG8Q96MW5 612 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 SLC7A5P2Q9GIP4 190 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 GID8Q9NWU2 228 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 TAS2R7Q9NYW3 318 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 SUCOQ9UBS9 1254 aaKnown RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 B3GNT3Q9Y2A9 372 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 MAN2B2Q9Y2E5 1009 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 LOXL2Q9Y4K0 774 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 PCDHB14Q9Y5E9 798 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 RNASET2O00584 256 aaKnown RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 RFXANKO14593 260 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 PDPK1O15530 556 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 CNOT3O75175 753 aaKnown RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 DKK1O94907 266 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 KCNH1O95259 989 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 HOXB9P17482 250 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 XCR1P46094 333 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 EIF2B2P49770 351 aaKnown RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 ARSFP54793 590 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 MC2RQ01718 297 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 IL11RAQ14626 422 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 RABL3Q5HYI8 236 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 TMEM151BQ8IW70 566 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 SUN3Q8TAQ9 357 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 LRTOMTQ8WZ04 291 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 ROPN1LQ96C74 230 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 ASB9Q96DX5 294 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 MVB12AQ96EY5 273 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 ITCHQ96J02 903 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 SEMA6AQ9H2E6 1030 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 IKZF5Q9H5V7 419 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 AKIRIN1Q9H9L7 192 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 SLC22A11Q9NSA0 550 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 GIN1Q9NXP7 522 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 GMPR2Q9P2T1 348 aaKnown RBP14.58□□□□□ -0.08
SHMT2-202ENST00000414700 CROTQ9UKG9 612 aa14.58□□□□□ -0.08
SHMT2-202ENST00000414700 A0A1W2PRB8 838 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 TRIM64BA6NI03 449 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 PLOD2O00469 737 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 FGF17O60258 216 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 SLC6A2P23975 617 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 FRKP42685 505 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-202ENST00000414700 PSME3P61289 254 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 SKP1P63208 163 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 HSPB3Q12988 150 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 GAB1Q13480 694 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 SELPLGQ14242 412 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 RGS21Q2M5E4 152 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 HACD2Q6Y1H2 254 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 RAB11FIP2Q7L804 512 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 COL26A1Q96A83 441 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 CLIP3Q96DZ5 547 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF764Q96H86 408 aaPredicted RBP14.57□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF681Q96N22 645 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 CCDC115Q96NT0 180 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 ARMC7Q9H6L4 198 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 RMND5AQ9H871 391 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 CXorf21Q9HAI6 301 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 FBXO8Q9NRD0 319 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 SRPK3Q9UPE1 567 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 B3GALT1Q9Y5Z6 326 aa14.57□□□□□ -0.08
SHMT2-202ENST00000414700 TRBV5-3A0A0A0MS03 114 aa14.56□□□□□ -0.08
SHMT2-202ENST00000414700 FAM149AA5PLN7 773 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms