RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 ZNF597Q96LX8 424 aa14.28□□□□□ -0.12
ACTB-202ENST00000414620 BRINP2Q9C0B6 783 aa14.28□□□□□ -0.12
ACTB-202ENST00000414620 TSPYL1Q9H0U9 437 aa14.28□□□□□ -0.12
ACTB-202ENST00000414620 CNIH4Q9P003 139 aa14.28□□□□□ -0.12
ACTB-202ENST00000414620 Q9UFV3 132 aa14.28□□□□□ -0.12
ACTB-202ENST00000414620 ZNF180Q9UJW8 692 aa14.28□□□□□ -0.12
ACTB-202ENST00000414620 DTX4Q9Y2E6 619 aa14.28□□□□□ -0.12
ACTB-202ENST00000414620 CSMD2Q7Z408 3487 aa14.27□□□□□ -0.12
ACTB-202ENST00000414620 PDZD2O15018 2839 aa14.27□□□□□ -0.12
ACTB-202ENST00000414620 HCN1O60741 890 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 WDR1O75083 606 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 ERAL1O75616 437 aaKnown RBP14.27□□□□□ -0.13
ACTB-202ENST00000414620 OTCP00480 354 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 CPMP14384 443 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 MSX1P28360 303 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 FEN1P39748 380 aaKnown RBP14.27□□□□□ -0.13
ACTB-202ENST00000414620 ADH7P40394 386 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 ZFP36L2P47974 494 aaKnown RBP14.27□□□□□ -0.13
ACTB-202ENST00000414620 GALNT1Q10472 559 aaPredicted RBP14.27□□□□□ -0.13
ACTB-202ENST00000414620 RPS6KA2Q15349 733 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 FAM111BQ6SJ93 734 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 LRRC25Q8N386 305 aaPredicted RBP14.27□□□□□ -0.13
ACTB-202ENST00000414620 ZNF615Q8N8J6 731 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 MNS1Q8NEH6 495 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 ADIPOR1Q96A54 375 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 TREX2Q9BQ50 279 aaPredicted RBP14.27□□□□□ -0.13
ACTB-202ENST00000414620 MCCC2Q9HCC0 563 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 TMEM216Q9P0N5 145 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 B4GALT7Q9UBV7 327 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 ADAM29Q9UKF5 820 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 NFU1Q9UMS0 254 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 PCDHA9Q9Y5H5 950 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 NPFFR2Q9Y5X5 522 aa14.27□□□□□ -0.13
ACTB-202ENST00000414620 C15orf38-AP3S2A0A0A6YYH1 394 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 TP53I11O14683 189 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 TRAPPC6AO75865 159 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 SNRPAP09012 282 aaKnown RBP14.26□□□□□ -0.13
ACTB-202ENST00000414620 PORP16435 677 aaPredicted RBP14.26□□□□□ -0.13
ACTB-202ENST00000414620 IGFBP2P18065 325 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 GPX3P22352 226 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 GCAP28676 217 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 DEKP35659 375 aaKnown RBP14.26□□□□□ -0.13
ACTB-202ENST00000414620 MASP1P48740 699 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 ALDH9A1P49189 494 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 CLCQ05315 142 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 DUSP2Q05923 314 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 FUT7Q11130 342 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 TBL3Q12788 808 aaKnown RBP14.26□□□□□ -0.13
ACTB-202ENST00000414620 EXOSC7Q15024 291 aaKnown RBP14.26□□□□□ -0.13
ACTB-202ENST00000414620 TMEM198Q66K66 360 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 WDR53Q7Z5U6 358 aaPredicted RBP14.26□□□□□ -0.13
ACTB-202ENST00000414620 CDH24Q86UP0 819 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 LIX1LQ8IVB5 337 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 TMEM151AQ8N4L1 468 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 C1orf52Q8N6N3 182 aaKnown RBP14.26□□□□□ -0.13
ACTB-202ENST00000414620 CDYL2Q8N8U2 506 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 ADCY4Q8NFM4 1077 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 NEIL3Q8TAT5 605 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 SPPL2AQ8TCT8 520 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 TP53INP1Q96A56 240 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 KLHL29Q96CT2 875 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 RILPQ96NA2 401 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 TMEM237Q96Q45 408 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 TRPS1Q9UHF7 1281 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 BCAP29Q9UHQ4 241 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 ZNF225Q9UK10 706 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 SNX6Q9UNH7 406 aa14.26□□□□□ -0.13
ACTB-202ENST00000414620 C1orf226A1L170 272 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 CAPN14A8MX76 684 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 GOLGA8RI6L899 631 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 GNB5O14775 395 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 TRIM3O75382 744 aaPredicted RBP14.25□□□□□ -0.13
ACTB-202ENST00000414620 SUPT7LO94864 414 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 KRT15P19012 456 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 WNT3P56703 355 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 NRG3P56975 720 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 DUSP8Q13202 625 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 TOMM20Q15388 145 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 LTB4RQ15722 352 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 UNC50Q53HI1 259 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 TBCELQ5QJ74 424 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 C10orf62Q5T681 223 aaPredicted RBP14.25□□□□□ -0.13
ACTB-202ENST00000414620 DESI1Q6ICB0 168 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 SLC48A1Q6P1K1 146 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 DMRTC2Q8IXT2 367 aaPredicted RBP14.25□□□□□ -0.13
ACTB-202ENST00000414620 VWA5B2Q8N398 1253 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 SIMC1Q8NDZ2 872 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 TM4SF18Q96CE8 201 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 DOCK7Q96N67 2140 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 ITPAQ9BY32 194 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 NXF5Q9H1B4 397 aaKnown RBP14.25□□□□□ -0.13
ACTB-202ENST00000414620 MAT2BQ9NZL9 334 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 CES1P1Q9UKY3 287 aa14.25□□□□□ -0.13
ACTB-202ENST00000414620 GOLGA6L10A6NI86 522 aa14.24□□□□□ -0.13
ACTB-202ENST00000414620 KDM4EB2RXH2 506 aaPredicted RBP14.24□□□□□ -0.13
ACTB-202ENST00000414620 MANBAO00462 879 aa14.24□□□□□ -0.13
ACTB-202ENST00000414620 GUCY1B2O75343 617 aa14.24□□□□□ -0.13
ACTB-202ENST00000414620 ESRRBO95718 433 aa14.24□□□□□ -0.13
ACTB-202ENST00000414620 GABRA1P14867 456 aa14.24□□□□□ -0.13
ACTB-202ENST00000414620 CHN1P15882 459 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms