RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ERI1Q8IV48 349 aaKnown RBP16.44■□□□□ 0.22
PHRF1-202ENST00000413872 OR4N5Q8IXE1 308 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF100Q8IYN0 542 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 PDLIM5Q96HC4 596 aaKnown RBP16.44■□□□□ 0.22
PHRF1-202ENST00000413872 TMEM19Q96HH6 336 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 SLC22A4Q9H015 551 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 HCSTQ9UBK5 93 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 DNAJB5O75953 348 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 PRLP01236 227 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 F3P13726 295 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 SLC9A3P48764 834 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 EMP2P54851 167 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 CLDN2P57739 230 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 TMEM203Q969S6 136 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 ZIC5Q96T25 663 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 PTGDR2Q9Y5Y4 395 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 NUMBLQ9Y6R0 609 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 MAST2Q6P0Q8 1798 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 OR52A4PA6NMU1 304 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 LAMP1P11279 417 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 HTR6P50406 440 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 FIGNL1Q6PIW4 674 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 OR51G2Q8NGK0 314 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 PTERQ96BW5 349 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 AASSQ9UDR5 926 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 KLHL21Q9UJP4 597 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 ITGB4P16144 1822 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 GLP1RP43220 463 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 SLC6A8P48029 635 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 CRYZQ08257 329 aaKnown RBP16.44■□□□□ 0.22
PHRF1-202ENST00000413872 MAD2L1BPQ15013 274 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-202ENST00000413872 PTCRAQ6ISU1 281 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-202ENST00000413872 IQCF2Q8IXL9 164 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 KDM1BQ8NB78 822 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 WDR77Q9BQA1 342 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-202ENST00000413872 ALOXE3Q9BYJ1 711 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 PRAMEF33A0A0G2JMD5 474 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 PHYHO14832 338 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 PLD2O14939 933 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 PRAMEF10O60809 474 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 CBLP22681 906 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 DLX2Q07687 328 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-202ENST00000413872 MEP1AQ16819 746 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 DEFB110Q30KQ9 67 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 FTMTQ8N4E7 242 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 OR51A7Q8NH64 312 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 APIPQ96GX9 242 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 TXLNGYQ9BZA5 131 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 EVA1AQ9H8M9 152 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 SDR39U1Q9NRG7 319 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-202ENST00000413872 CPNE7Q9UBL6 633 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 SARDHQ9UL12 918 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 TRAPPC13A5PLN9 417 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 FLRT2O43155 660 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 CACNG3O60359 315 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 DDCP20711 480 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 CRISP1P54107 249 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 KCNAB2Q13303 367 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 SGCAQ16586 387 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 OCLNQ16625 522 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF367Q7RTV3 350 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 TRIM73Q86UV7 250 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF761Q86XN6 746 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-202ENST00000413872 TOMM5Q8N4H5 51 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 LINC01465Q8N7H1 131 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 HPS1Q92902 700 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 DDIT4LQ96D03 193 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 GSTO2Q9H4Y5 243 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 RASAL1O95294 804 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF789Q5FWF6 425 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 NADSYN1Q6IA69 706 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 S100A16Q96FQ6 103 aaKnown RBP16.43■□□□□ 0.22
PHRF1-202ENST00000413872 MALT1Q9UDY8 824 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 RNF6Q9Y252 685 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 YKT6O15498 198 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 ADAP00813 363 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 IFNA21P01568 189 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 ADAM15Q13444 863 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 RIN1Q13671 783 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 EFR3AQ14156 821 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 LETMD1Q6P1Q0 360 aa16.43■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF551Q7Z340 670 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-202ENST00000413872 GGT1P19440 569 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 AOAHP28039 575 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 CTBSQ01459 385 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 TANGO2Q6ICL3 276 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 LCN8Q6JVE9 175 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 SLC5A8Q8N695 610 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 DHRS1Q96LJ7 313 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 SLC7A11Q9UPY5 501 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 MYH8P13535 1937 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 RNASET2O00584 256 aaKnown RBP16.42■□□□□ 0.22
PHRF1-202ENST00000413872 BCAT2O15382 392 aaPredicted RBP16.42■□□□□ 0.22
PHRF1-202ENST00000413872 CHP2O43745 196 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 MCATQ8IVS2 390 aaKnown RBP16.42■□□□□ 0.22
PHRF1-202ENST00000413872 TTYH2Q9BSA4 534 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 STOML2Q9UJZ1 356 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 HSPE1-MOB4S4R3N1 261 aa16.42■□□□□ 0.22
PHRF1-202ENST00000413872 ETFAP13804 333 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms