RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 PLOD3O60568 738 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 ZNF254O75437 659 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 GPX5O75715 221 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 GRAP2O75791 330 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 GBAP04062 536 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 CT45A10P0DMU9 189 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 B4GALT1P15291 398 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 ZP3P21754 424 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 IGHV1-2P23083 117 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 CALML3P27482 149 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 CTRLP40313 264 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 PRKCIP41743 596 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 ALDH3B2P48448 385 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 HAND2P61296 217 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 PAX5Q02548 391 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 MADCAM1Q13477 382 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 HEPACAMQ14CZ8 416 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 RPS6KA1Q15418 735 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 SPHARQ15513 63 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 PRR4Q16378 134 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 GLYR1Q49A26 553 aaPredicted RBP0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 KRBOX4Q5JUW0 171 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 GORABQ5T7V8 394 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 TAF3Q5VWG9 929 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 Q5W150 140 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 ALKBH5Q6P6C2 394 aaKnown RBP0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 PODNL1Q6PEZ8 512 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 MOB1BQ7L9L4 216 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 DNAJB7Q7Z6W7 309 aaPredicted RBP0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 TMEM179BQ7Z7N9 219 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 TMEM61Q8N0U2 210 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 RNF149Q8NC42 400 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 TRPV3Q8NET8 790 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 FER1L6-AS2Q96M78 137 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 ZNF559Q9BR84 538 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 TSSK1BQ9BXA7 367 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 ACPTQ9BZG2 426 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 Q9H3A6 140 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 GLIPR2Q9H4G4 154 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 EHD1Q9H4M9 534 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 INPP5EQ9NRR6 644 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 PLEK2Q9NYT0 353 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 SNX7Q9UNH6 387 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 THSD7BQ9C0I4 1608 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 TENM1Q9UKZ4 2725 aa0.66□□□□□ -2.3
RNU2-55P-201ENST00000411146 ACEP12821 1306 aa0.65□□□□□ -2.3
RNU2-55P-201ENST00000411146 KIF7Q2M1P5 1343 aa0.65□□□□□ -2.3
RNU2-55P-201ENST00000411146 CABIN1Q9Y6J0 2220 aa0.65□□□□□ -2.3
RNU2-55P-201ENST00000411146 COL27A1Q8IZC6 1860 aaPredicted RBP0.65□□□□□ -2.3
RNU2-55P-201ENST00000411146 TRBV6-6A0A0A6YYG2 114 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 OR7A17O14581 309 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 CTDSPLO15194 276 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 CLN5O75503 358 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 MMP23AO75900 390 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 SUPT7LO94864 414 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 GGPS1O95749 300 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 RPS2P15880 293 aaKnown RBP0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 ADRA2CP18825 462 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 IL11P20809 199 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 ACP1P24666 158 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 HTR1FP30939 366 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 KCNJ1P48048 391 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 GPC3P51654 580 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 CCR4P51679 360 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 CLNS1AP54105 237 aaKnown RBP0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZNF45Q02386 682 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 ORC2Q13416 577 aaPredicted RBP0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 COG2Q14746 738 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZIC1Q15915 447 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 KYNUQ16719 465 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 KCTD19Q17RG1 926 aaPredicted RBP0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 SPATA1Q5VX52 437 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 FAM91A1Q658Y4 838 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 LRRC31Q6UY01 552 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 Q6ZRG5 221 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 C11orf57Q6ZUT1 292 aaPredicted RBP0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 MOB2Q70IA6 237 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 KRT77Q7Z794 578 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 LYPD1Q8N2G4 141 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 RFESDQ8TAC1 157 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 NEIL3Q8TAT5 605 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 SETD6Q8TBK2 473 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 SPATA18Q8TC71 538 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 MYDGFQ969H8 173 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 VPS33AQ96AX1 596 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 RMDN1Q96DB5 314 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 NOL4LQ96MY1 436 aaPredicted RBP0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 IL4I1Q96RQ9 567 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 AGPAT1Q99943 283 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 ZNF670Q9BS34 389 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 DPH7Q9BTV6 452 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 SLC25A23Q9BV35 468 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 TM2D1Q9BX74 207 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 TRIM7Q9C029 511 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 ELOVL4Q9GZR5 314 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 GDF3Q9NR23 364 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 PDRG1Q9NUG6 133 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 DPM3Q9P2X0 92 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 PARD3Q8TEW0 1356 aa0.65□□□□□ -2.31
RNU2-55P-201ENST00000411146 SHANK1Q9Y566 2161 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms