RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 HMX3A6NHT5 357 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 CASC3O15234 703 aaKnown RBP15.77■□□□□ 0.11
LIMS2-208ENST00000410011 TMPRSS11DO60235 418 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 ADRB3P13945 408 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 SMSP52788 366 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 NKX2-5P52952 324 aaPredicted RBP15.77■□□□□ 0.11
LIMS2-208ENST00000410011 WNT4P56705 351 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 GNA13Q14344 377 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 GINS1Q14691 196 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 SYPL1Q16563 259 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 C9orf64Q5T6V5 341 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 LIPKQ5VXJ0 399 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 TMEM64Q6YI46 380 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 SLC7A5P1Q8MH63 180 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 OR4K5Q8NGD3 323 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 PRRC1Q96M27 445 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 NELL2Q99435 816 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 OR51I1Q9H343 314 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 SYNDIG1Q9H7V2 258 aa15.77■□□□□ 0.11
LIMS2-208ENST00000410011 PLEKHB1Q9UF11 243 aaPredicted RBP15.77■□□□□ 0.11
LIMS2-208ENST00000410011 CDRT1O95170 752 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 MSL3P1P0C860 447 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 OR12D1P0DN82 309 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 NR2F6P10588 404 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 ACP2P11117 423 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 WEE1P30291 646 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 ANXA11P50995 505 aaKnown RBP15.76■□□□□ 0.11
LIMS2-208ENST00000410011 METAP1P53582 386 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 FOXD4Q12950 439 aaPredicted RBP15.76■□□□□ 0.11
LIMS2-208ENST00000410011 HNRNPA1L2Q32P51 320 aaKnown RBP15.76■□□□□ 0.11
LIMS2-208ENST00000410011 NXNL2Q5VZ03 156 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 METRNLQ641Q3 311 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 ADAMTSL4Q6UY14 1074 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 UBE3DQ7Z6J8 389 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 LAPTM4BQ86VI4 370 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 EXOSC8Q96B26 276 aaKnown RBP15.76■□□□□ 0.11
LIMS2-208ENST00000410011 ST6GAL2Q96JF0 529 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 SLC35G5Q96KT7 338 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 LRR1Q96L50 414 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 NEDD4LQ96PU5 975 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 ACAT2Q9BWD1 397 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 SLC22A4Q9H015 551 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 TMEM39AQ9NV64 488 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 PLAGL1Q9UM63 463 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 A0A0A6YYD5 115 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 EDDM13A0A1B0GTR0 161 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 WWP2O00308 870 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 NDUFS4O43181 175 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 PRODHO43272 600 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 IDH3BO43837 385 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 CLEC3AO75596 197 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 FGF9P31371 208 aaPredicted RBP15.76■□□□□ 0.11
LIMS2-208ENST00000410011 ETV5P41161 510 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 ETV1P50549 477 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 ZMAT1Q5H9K5 638 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 ACSM5Q6NUN0 579 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 PAQR6Q6TCH4 344 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 KCTD7Q96MP8 289 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 AMDHD1Q96NU7 426 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 SLX1AQ9BQ83 275 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 MIXL1Q9H2W2 232 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 GLIPR2Q9H4G4 154 aa15.76■□□□□ 0.11
LIMS2-208ENST00000410011 CUEDC1Q9NWM3 386 aaPredicted RBP15.76■□□□□ 0.11
LIMS2-208ENST00000410011 SF3B6Q9Y3B4 125 aaKnown RBP15.76■□□□□ 0.11
LIMS2-208ENST00000410011 A0A1W2PPV9 198 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 PLD2O14939 933 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 FKTNO75072 461 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 FGBP02675 491 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 NR2F1P10589 423 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 ADH5P11766 374 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 MYL12AP19105 171 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 ELAVL3Q14576 367 aaKnown RBP15.75■□□□□ 0.11
LIMS2-208ENST00000410011 OR4C11Q6IEV9 310 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 CD200R1LQ6Q8B3 271 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 BCDIN3DQ7Z5W3 292 aaKnown RBP15.75■□□□□ 0.11
LIMS2-208ENST00000410011 RDH10Q8IZV5 341 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 TMEM163Q8TC26 289 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 AP3S1Q92572 193 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 ZSWIM3Q96MP5 696 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 CAMK1GQ96NX5 476 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 TEX10Q9NXF1 929 aaPredicted RBP15.75■□□□□ 0.11
LIMS2-208ENST00000410011 HCFC2Q9Y5Z7 792 aa15.75■□□□□ 0.11
LIMS2-208ENST00000410011 A0A0G2JPF8 293 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 A0A1W2PQ09 198 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 MEIOCA2RUB1 952 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 HNRNPCL2B2RXH8 293 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 HNRNPCL3B7ZW38 293 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 EPHX1P07099 455 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 HNRNPCL4P0DMR1 293 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 RCVRNP35243 200 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 KHKP50053 298 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 HYAL2Q12891 473 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 FLYWCH1Q4VC44 716 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 FAM46CQ5VWP2 391 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 BHLHB9Q6PI77 547 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 COMTD1Q86VU5 262 aa15.74■□□□□ 0.11
LIMS2-208ENST00000410011 C2orf73Q8N5S3 287 aaPredicted RBP15.74■□□□□ 0.11
LIMS2-208ENST00000410011 CELF5Q8N6W0 485 aaKnown RBP15.74■□□□□ 0.11
LIMS2-208ENST00000410011 MRPL43Q8N983 215 aaKnown RBP15.74■□□□□ 0.11
LIMS2-208ENST00000410011 SUN3Q8TAQ9 357 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms