RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 MC3RP41968 323 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 MAP2K4P45985 399 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 MASP1P48740 699 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 UBE2IP63279 158 aaKnown RBP18.95■□□□□ 0.62
USP39-204ENST00000409766 NFATC3Q12968 1075 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 EIF2B5Q13144 721 aaKnown RBP18.95■□□□□ 0.62
USP39-204ENST00000409766 MLIPQ5VWP3 458 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 OLIG3Q7RTU3 272 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 PRSS48Q7RTY5 328 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 LACC1Q8IV20 430 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 VANGL1Q8TAA9 524 aaPredicted RBP18.95■□□□□ 0.62
USP39-204ENST00000409766 GSDMCQ9BYG8 508 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 ROGDIQ9GZN7 287 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 ANKMY1Q9P2S6 941 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 SPTY2D1-AS1A0A0U1RR47 76 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 IGFBP4P22692 258 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 DGKEP52429 567 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 TNFRSF17Q02223 184 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 FOXD4Q12950 439 aaPredicted RBP18.94■□□□□ 0.62
USP39-204ENST00000409766 GNA13Q14344 377 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 SUZ12Q15022 739 aaKnown RBP18.94■□□□□ 0.62
USP39-204ENST00000409766 KLHL17Q6TDP4 642 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 DEF8Q6ZN54 512 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 SLC16A12Q6ZSM3 486 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 P3H2Q8IVL5 708 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 CCDC103Q8IW40 242 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 SFTPA2Q8IWL1 248 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 RORBQ92753 470 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 THAP11Q96EK4 314 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 SERINC2Q96SA4 455 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 C3orf14Q9HBI5 128 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 PLCXD1Q9NUJ7 323 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 ENOPH1Q9UHY7 261 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 ENTPD2Q9Y5L3 495 aa18.94■□□□□ 0.62
USP39-204ENST00000409766 LOC105369274A0A096LPK9 316 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 LOC102723532A0A0G2JNH3 316 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 FAM227AF5H4B4 570 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 CELA2BP08218 269 aaPredicted RBP18.93■□□□□ 0.62
USP39-204ENST00000409766 GABRB1P18505 474 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 ELAVL4P26378 380 aaKnown RBP18.93■□□□□ 0.62
USP39-204ENST00000409766 BUD31P41223 144 aaPredicted RBP18.93■□□□□ 0.62
USP39-204ENST00000409766 IDH2P48735 452 aaKnown RBP18.93■□□□□ 0.62
USP39-204ENST00000409766 MAN2A2P49641 1150 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 RELAQ04206 551 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 DEFB134Q4QY38 66 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 ZNF542PQ5EBM4 170 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 FRMPD2BQ6IN97 320 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 OR4N4Q8N0Y3 316 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 NUP43Q8NFH3 380 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 ZCCHC10Q8TBK6 192 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 GAB3Q8WWW8 586 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 SPATA5L1Q9BVQ7 753 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 BTBD2Q9BX70 525 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 KLHL25Q9H0H3 589 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 ANKRA2Q9H9E1 313 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 GPR27Q9NS67 375 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 EVA1BQ9NVM1 165 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 ZNF226Q9NYT6 803 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 KCNE3Q9Y6H6 103 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 A0A0G2JPF8 293 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 FAM221BA6H8Z2 402 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 URADA6NGE7 173 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 C2orf74A8MZ97 194 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 HNRNPCL2B2RXH8 293 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 HNRNPCL3B7ZW38 293 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 EPPINO95925 133 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 H1F0P07305 194 aaKnown RBP18.93■□□□□ 0.62
USP39-204ENST00000409766 HNRNPCL4P0DMR1 293 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 LSSP48449 732 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 FZD2Q14332 565 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 PTGES3Q15185 160 aaKnown RBP18.93■□□□□ 0.62
USP39-204ENST00000409766 SEC23BQ15437 767 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 AHSA2Q719I0 299 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 ANKRD13BQ86YJ7 626 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 DEPDC4Q8N2C3 294 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 SVOPQ8N4V2 548 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 CAMKVQ8NCB2 501 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 OR7D2Q96RA2 312 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 ZFYVE21Q9BQ24 234 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 FUZQ9BT04 418 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 ACOT13Q9NPJ3 140 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 FTSJ1Q9UET6 329 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 PHF11Q9UIL8 331 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 ENPP5Q9UJA9 477 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 TMCC3Q9ULS5 477 aa18.93■□□□□ 0.62
USP39-204ENST00000409766 DSPPQ9NZW4 1301 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 KIR2DS5A0A0G2JLQ3 304 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 A0A0G2JNG1 304 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 KIR2DS3K7RE56 304 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 CPN2P22792 545 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 TEKQ02763 1124 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 MVKQ03426 396 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 RUNX2Q13950 521 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 KIR2DS5Q14953 304 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 LTB4RQ15722 352 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 DCST1Q5T197 706 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 SYT6Q5T7P8 510 aaPredicted RBP18.92■□□□□ 0.62
USP39-204ENST00000409766 PRAMEF8Q5VWM4 474 aa18.92■□□□□ 0.62
USP39-204ENST00000409766 PRAMEF7Q5VXH5 474 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms