RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 RTL4Q6ZR62 310 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 PSD4Q8NDX1 1056 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 SGCZQ96LD1 299 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 FRMD6Q96NE9 622 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 PAIP2Q9BPZ3 127 aaKnown RBP16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 MIEF1Q9NQG6 463 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 MAT2BQ9NZL9 334 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 SEC14L3Q9UDX4 400 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 ZDHHC2Q9UIJ5 367 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 ENTPD4Q9Y227 616 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 CLEC18AA5D8T8 446 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 LYPLA1O75608 230 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 AGFG2O95081 481 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 UNC5CO95185 931 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 NADKO95544 446 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 HSPA4LO95757 839 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 DHRS4L1P0CG22 281 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 NR0B1P51843 470 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 GPR85P60893 370 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 EXOSC7Q15024 291 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 LTB4RQ15722 352 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 GALNTL6Q49A17 601 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 TRMT12Q53H54 448 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 CLEC18BQ6UXF7 455 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 TICAM1Q8IUC6 712 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 TAGAPQ8N103 731 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 ANKRD42Q8N9B4 389 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 CLEC18CQ8NCF0 446 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 TP53INP1Q96A56 240 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 BBS4Q96RK4 519 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 TSPAN10Q9H1Z9 355 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 ZNF639Q9UID6 485 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 OSGIN2Q9Y236 505 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 POLEQ07864 2286 aa16.58■□□□□ 0.24
PDLIM2-206ENST00000409141 TMEM114B3SHH9 223 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 NPIPA5E9PKD4 350 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 LSM1O15116 133 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 ITM2AO43736 263 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 WISP2O76076 250 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 ZNF24P17028 368 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 TACR1P25103 407 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 MPIP34949 423 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 KCNK10P57789 538 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 RPL38P63173 70 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 CASP8Q14790 479 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 ZNF791Q3KP31 576 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 RFTN2Q52LD8 501 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 HHATQ5VTY9 493 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 CES4AQ5XG92 561 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 IKBIPQ70UQ0 350 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 ZNF441Q8N8Z8 693 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 GOLM1Q8NBJ4 401 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 POGLUT1Q8NBL1 392 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 C16orf52Q8NHV5 167 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 CTHRC1Q96CG8 243 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 EGLN2Q96KS0 407 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 TMBIM4Q9HC24 238 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 NPIPA1Q9UND3 350 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 CFL2Q9Y281 166 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 RELNP78509 3460 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 USP9XQ93008 2570 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 CROCCQ5TZA2 2017 aa16.57■□□□□ 0.24
PDLIM2-206ENST00000409141 SEMA7AO75326 666 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 SKAP2O75563 359 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 P04436 131 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 PCSK2P16519 638 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 CNR1P21554 472 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 GRK2P25098 689 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 RFC3P40938 356 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 ABCE1P61221 599 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 MRPS35P82673 323 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 PRSS53Q2L4Q9 553 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 KRTCAP3Q53RY4 240 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 RNFT1Q5M7Z0 435 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 LYPD8Q6UX82 237 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 OR9A2Q8NGT5 310 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 ZNF675Q8TD23 568 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 KAT2AQ92830 837 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 GFM2Q969S9 779 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 ADIPOR1Q96A54 375 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 SPACA9Q96E40 222 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 PPP3R2Q96LZ3 170 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 ZNF395Q9H8N7 513 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 SACM1LQ9NTJ5 587 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 DEPPQ9NTK1 212 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 RYDENQ9NUL5 291 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 TAS2R7Q9NYW3 318 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 TMED5Q9Y3A6 229 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 ZGRF1Q86YA3 2104 aa16.56■□□□□ 0.24
PDLIM2-206ENST00000409141 FLNBO75369 2602 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 TMEM120BA0PK00 339 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 G3V3Y1 287 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 PEX11AO75192 247 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 CBX7O95931 251 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 BGNP21810 368 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 GPX3P22352 226 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 SOX18P35713 384 aa16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 MAGOHP61326 146 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-206ENST00000409141 CEBPEQ15744 281 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms