RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 RNF113AO15541 343 aaKnown RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 GRID2O43424 1007 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SMPD2O60906 423 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 LRP3O75074 770 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 PEX11AO75192 247 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SCGB2A1O75556 95 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 MTRF1O75570 445 aaKnown RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 CEACAM4O75871 244 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 TXNDC12O95881 172 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 IFNB1P01574 187 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 PROS1P07225 676 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 UMODP07911 640 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 LYNP07948 512 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 PRSS56P0CW18 603 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 MYOGP15173 224 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 GNSP15586 552 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 AKT2P31751 481 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 GPR183P32249 361 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 HSPA1LP34931 641 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SLC6A8P48029 635 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 MTTPP55157 894 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 PAX9P55771 341 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 KLHL30Q0D2K2 578 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SPP2Q13103 211 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 PDZK1IP1Q13113 114 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 EXOSC7Q15024 291 aaKnown RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 C3AR1Q16581 482 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 HSP90AB3PQ58FF7 597 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 CMPK2Q5EBM0 449 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SPANXN4Q5MJ08 99 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 ARHGAP17Q68EM7 881 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 CAPN13Q6MZZ7 669 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 KIAA1161Q6NSJ0 714 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 CDC42EP5Q6NZY7 148 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZER1Q7Z7L7 766 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SMIM29Q86T20 159 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 VPS36Q86VN1 386 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 HOGA1Q86XE5 327 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 DCUN1D3Q8IWE4 304 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 NECAB1Q8N987 351 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 OR5M9Q8NGP3 310 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 CD99L2Q8TCZ2 262 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SMAP2Q8WU79 429 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 TCP11Q8WWU5 503 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 PINX1Q96BK5 328 aaKnown RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 MAGED4Q96JG8 741 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 CXorf58Q96LI9 332 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 FICDQ9BVA6 458 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 PAPOLGQ9BWT3 736 aaKnown RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 HOXD1Q9GZZ0 328 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZNF71Q9NQZ8 489 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SLC35D1Q9NTN3 355 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 CNOT2Q9NZN8 540 aaKnown RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZNF490Q9ULM2 529 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 PLCL2Q9UPR0 1127 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 ENTPD4Q9Y227 616 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 ATP6V1DQ9Y5K8 247 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZHX2Q9Y6X8 837 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SH3TC1Q8TE82 1336 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 CDHR2Q9BYE9 1310 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 SIPA1L3O60292 1781 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 N4BP2Q86UW6 1770 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 PALLDQ8WX93 1383 aa4.14□□□□□ -1.75
HMGB3P18-201ENST00000406327 DISP2A7MBM2 1401 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZNF609O15014 1411 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 PKD1L3Q7Z443 1732 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 CRYBG1Q9Y4K1 1723 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 A0A0U1RRA0 63 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 LMO7DNF2Z398 122 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 BUB1O43683 1085 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 KIAA0513O60268 411 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 CSDE1O75534 798 aaKnown RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 IDH1O75874 414 aaKnown RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRT6BP04259 564 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 MBL2P11226 248 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 ADSSP30520 456 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 ADORA1P30542 326 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 MDH1P40925 334 aaKnown RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 SOX3P41225 446 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 ACADSBP45954 432 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 LEPRP48357 1165 aaKnown RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 KRT6CP48668 564 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 XGP55808 180 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 GABPB1Q06547 395 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 HNRNPDQ14103 355 aaKnown RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 ZCCHC12Q6PEW1 402 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 ISLR2Q6UXK2 745 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 ASRGL1Q7L266 308 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 YRDCQ86U90 279 aaKnown RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 DND1Q8IYX4 353 aaKnown RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 RDH11Q8TC12 318 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 MRGPRDQ8TDS7 321 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 C2orf48Q96LS8 159 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 TCEANC2Q96MN5 208 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 ERGIC2Q96RQ1 377 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 GPA33Q99795 319 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 RIBC2Q9H4K1 309 aa4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 FAM124BQ9H5Z6 455 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 FAM212BQ9NTI7 297 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P18-201ENST00000406327 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms