RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 NR0B1P51843 470 aaKnown RBP8.59□□□□□ -1.03
LIG4-202ENST00000405925 INAQ16352 499 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 UGT8Q16880 541 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 GPR107Q5VW38 600 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 ZBTB46Q86UZ6 589 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 OR6K6Q8NGW6 343 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 NUDT8Q8WV74 236 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 OR6C1Q96RD1 312 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 SPATA9Q9BWV2 254 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 SDHAF3Q9NRP4 125 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 HCN4Q9Y3Q4 1203 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 EFCAB7A8K855 629 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 GAPDHSO14556 408 aaPredicted RBP8.59□□□□□ -1.03
LIG4-202ENST00000405925 KLK8O60259 260 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 AK1P00568 194 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 MYF5P13349 255 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 TRIM23P36406 574 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 IST1P53990 364 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 GBX1Q14549 363 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 SGCBQ16585 318 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 UGT3A2Q3SY77 523 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 TLDC1Q6P9B6 456 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 HSDL2Q6YN16 418 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 BMP8AQ7Z5Y6 402 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 FUNDC1Q8IVP5 155 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 FBXL6Q8N531 539 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 OR5L2Q8NGL0 311 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 NETO1Q8TDF5 533 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 CCDC74AQ96AQ1 378 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 ZHX1-C8orf76Q96EF9 292 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 BMFQ96LC9 184 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 TEX37Q96LM6 180 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 CD180Q99467 661 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 C1QTNF3Q9BXJ4 246 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 C6orf62Q9GZU0 229 aaPredicted RBP8.59□□□□□ -1.03
LIG4-202ENST00000405925 PRDM6Q9NQX0 595 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 ADAM29Q9UKF5 820 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 PRDM4Q9UKN5 801 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 ATG4BQ9Y4P1 393 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 A0A1W2PQF6 199 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 LMO7DNF2Z398 122 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 TP53I11O14683 189 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 AHSA1O95433 338 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 BMP1P13497 986 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 CBLP22681 906 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 ALDH3A2P51648 485 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 SFT2D3Q587I9 215 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 FAM69BQ5VUD6 431 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 ZNF550Q7Z398 422 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 ZNF547Q8IVP9 402 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 PACRGLQ8N7B6 248 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 RCBTB1Q8NDN9 531 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 OR2A1Q8NGT9 310 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 ZFPM2Q8WW38 1151 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 OR4K3Q96R72 315 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 LRRC61Q9BV99 259 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 MRPS26Q9BYN8 205 aaKnown RBP8.59□□□□□ -1.03
LIG4-202ENST00000405925 UCK2Q9BZX2 261 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 S1PR5Q9H228 398 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 TTYH1Q9H313 450 aaPredicted RBP8.59□□□□□ -1.03
LIG4-202ENST00000405925 PTGES2Q9H7Z7 377 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 TMEM181Q9P2C4 612 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 GSTK1Q9Y2Q3 226 aa8.59□□□□□ -1.03
LIG4-202ENST00000405925 CHRNB1P11230 501 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 FMO3P31513 532 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 NUDT6P53370 316 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 GPLD1P80108 840 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 DYNC1I2Q13409 638 aaKnown RBP8.59□□□□□ -1.04
LIG4-202ENST00000405925 GPR19Q15760 415 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 XKR7Q5GH72 579 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 CES4AQ5XG92 561 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 NANOGNBQ7Z5D8 188 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.59□□□□□ -1.04
LIG4-202ENST00000405925 APLFQ8IW19 511 aaPredicted RBP8.59□□□□□ -1.04
LIG4-202ENST00000405925 PRR22Q8IZ63 422 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 OR51Q1Q8NH59 317 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 NODALQ96S42 347 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 EPYCQ99645 322 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 ARRDC1-AS1Q9H2J1 176 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 CHRDQ9H2X0 955 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 RNF215Q9Y6U7 377 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 DOCK6Q96HP0 2047 aa8.59□□□□□ -1.04
LIG4-202ENST00000405925 THSD7BQ9C0I4 1608 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 FURINP09958 794 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 CPMP14384 443 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 GSTM3P21266 225 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 GFERP55789 205 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 TNFRSF17Q02223 184 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 SRSF5Q13243 272 aaKnown RBP8.58□□□□□ -1.04
LIG4-202ENST00000405925 SELPLGQ14242 412 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.58□□□□□ -1.04
LIG4-202ENST00000405925 COLEC12Q5KU26 742 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 RFKQ969G6 155 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 CTRCQ99895 268 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 CDADC1Q9BWV3 514 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 TSSK6Q9BXA6 273 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 SOX17Q9H6I2 414 aaPredicted RBP8.58□□□□□ -1.04
LIG4-202ENST00000405925 CD320Q9NPF0 282 aa8.58□□□□□ -1.04
LIG4-202ENST00000405925 MBD1Q9UIS9 605 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms