RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 IGKV3-11P04433 115 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 PYGBP11216 843 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 PCNAP12004 261 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 BMP5P22003 454 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 SERPINB3P29508 390 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 TLX1P31314 330 aaPredicted RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 RAP1GDS1P52306 607 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 IGLV3-21P80748 117 aaPredicted RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 BIKQ13323 160 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 CUL3Q13618 768 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 SNTB1Q13884 538 aaKnown RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 C10orf62Q5T681 223 aaPredicted RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 DEPDC1Q5TB30 811 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 KHDRBS2Q5VWX1 349 aaKnown RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 FBXW10Q5XX13 1052 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 SLC29A4Q7RTT9 530 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 CAMKMTQ7Z624 323 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 C9orf40Q8IXQ3 194 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 LRRC25Q8N386 305 aaPredicted RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 MREGQ8N565 214 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 HUS1BQ8NHY5 278 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 NEIL3Q8TAT5 605 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 RNASE6Q93091 150 aaKnown RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 PHF21BQ96EK2 531 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 L3HYPDHQ96EM0 354 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 CMTM7Q96FZ5 175 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 FBXL20Q96IG2 436 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 ZNF597Q96LX8 424 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 NSUN5Q96P11 429 aaKnown RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 GAL3ST4Q96RP7 486 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 CENPKQ9BS16 269 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 DOHHQ9BU89 302 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 SLC6A15Q9H2J7 730 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 LIME1Q9H400 295 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 RPF2Q9H7B2 306 aaKnown RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 SH2D2AQ9NP31 389 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 ACKR4Q9NPB9 350 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 DMRT3Q9NQL9 472 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 MS4A12Q9NXJ0 267 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 FOXD3Q9UJU5 478 aaPredicted RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 ZNF225Q9UK10 706 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 RAB21Q9UL25 225 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 RNF11Q9Y3C5 154 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 EML6Q6ZMW3 1958 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 C15orf38-AP3S2A0A0A6YYH1 394 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 LRRC3CA6NJW4 275 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 RTCAO00442 366 aaKnown RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 PROM1O43490 865 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 OR10H2O60403 315 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 DLX3O60479 287 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 GLRA3O75311 464 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 CLDN9O95484 217 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 RFPL3SP0C7P2 107 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 FOSL1P15407 271 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 HOXB4P17483 251 aaPredicted RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 GDF1P27539 372 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 TRPC1P48995 793 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 HERVK_113P63132 956 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 SLC18A2Q05940 514 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 FOXD4Q12950 439 aaPredicted RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 ACSF3Q4G176 576 aaPredicted RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 TBCELQ5QJ74 424 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 ZNF678Q5SXM1 525 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 CDC20BQ86Y33 519 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 LACC1Q8IV20 430 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 OR4N5Q8IXE1 308 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 RIBC1Q8N443 379 aaPredicted RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 RELL2Q8NC24 303 aaPredicted RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 OR10G3Q8NGC4 313 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 EPS8L3Q8TE67 593 aaKnown RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 TANKQ92844 425 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 HSPBAP1Q96EW2 488 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 PELOQ9BRX2 385 aaKnown RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 ERVK-6Q9BXR3 956 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 NOL11Q9H8H0 719 aaKnown RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 ACTR8Q9H981 624 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 MKS1Q9NXB0 559 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 TBK1Q9UHD2 729 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 DCDC2Q9UHG0 476 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 LGALS13Q9UHV8 139 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 PHF11Q9UIL8 331 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 ANGPTL3Q9Y5C1 460 aa11.34□□□□□ -0.59
PRAME-204ENST00000403441 CHCHD2Q9Y6H1 151 aaPredicted RBP11.34□□□□□ -0.59
PRAME-204ENST00000403441 OR6C76A6NM76 312 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 AHRRA9YTQ3 701 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 G3V2L1 256 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 GOLGA8RI6L899 631 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 SAP18O00422 153 aaKnown RBP11.33□□□□□ -0.6
PRAME-204ENST00000403441 PLPP1O14494 284 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 SH3BGRLO75368 114 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 SEMA3DO95025 777 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 TGFB1P01137 390 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 PROCP04070 461 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 FBXO45P0C2W1 286 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 ALOX15P16050 662 aaPredicted RBP11.33□□□□□ -0.6
PRAME-204ENST00000403441 IMPDH1P20839 514 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 ATP5F1P24539 256 aaPredicted RBP11.33□□□□□ -0.6
PRAME-204ENST00000403441 CRHR1P34998 444 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 PRKAA2P54646 552 aa11.33□□□□□ -0.6
PRAME-204ENST00000403441 TNFRSF17Q02223 184 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms