RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ZNF615Q8N8J6 731 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 WDSUB1Q8N9V3 476 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ANKRD7Q92527 254 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 HGDQ93099 445 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 MAGOHBQ96A72 148 aaKnown RBP10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PTCD3Q96EY7 689 aaKnown RBP10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 RBM18Q96H35 190 aaKnown RBP10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PITHD1Q9GZP4 211 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 OPN3Q9H1Y3 402 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PIGMQ9H3S5 423 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 SERHLQ9NQF3 203 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 DNAJC11Q9NVH1 559 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 GPRC5BQ9NZH0 403 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 NDRG3Q9UGV2 375 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PACSIN3Q9UKS6 424 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 ASB4Q9Y574 426 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 PLCE1Q9P212 2302 aa10.78□□□□□ -0.68
SPTLC1P3-201ENST00000403408 C2orf92A0A1B0GVN3 265 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 A0A1W2PR48 441 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RNF223E7ERA6 249 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PLOD2O00469 737 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CES2O00748 559 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PLPP1O14494 284 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MSTNO14793 375 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 KLF4O43474 513 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 HCRTR2O43614 444 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 EEDO75530 441 aaKnown RBP10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GPR75O95800 540 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ACTL6AO96019 429 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CGAP01215 116 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ABCB1P08183 1280 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 S1PR1P21453 382 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CD79BP40259 229 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SSR2P43308 183 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 KIR2DL2P43627 348 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MASP1P48740 699 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CLDN15P56746 228 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CLDN18P56856 261 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PLIN5Q00G26 463 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TNFRSF17Q02223 184 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FUT7Q11130 342 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RCAN2Q14206 197 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SF3B4Q15427 424 aaKnown RBP eCLIP10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR4D1Q15615 310 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DEPDC1Q5TB30 811 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ANKRD34AQ69YU3 496 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MRM1Q6IN84 353 aaKnown RBP10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 C20orf204Q6ZNR8 217 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PACS2Q86VP3 889 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZC3HC1Q86WB0 502 aaKnown RBP10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RDH11Q8TC12 318 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MAIP1Q8WWC4 291 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 RIT1Q92963 219 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZC3HAV1LQ96H79 300 aaKnown RBP10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ZFP3Q96NJ6 502 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SECISBP2Q96T21 854 aaKnown RBP10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TM9SF2Q99805 663 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MCMBPQ9BTE3 642 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PHACTR1Q9C0D0 580 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR2B2Q9GZK3 357 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 NXF5Q9H1B4 397 aaKnown RBP10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CTNNAL1Q9UBT7 734 aa10.77□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MGAM2Q2M2H8 2515 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 LRRC14BA6NHZ5 514 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR6C76A6NM76 312 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 H0Y3Z8 333 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TP53I11O14683 189 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PGRMC2O15173 223 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PIAS1O75925 651 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ABCD3P28288 659 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 UGT2B10P36537 528 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 DMTNQ08495 405 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CHIT1Q13231 466 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 NNATQ16517 81 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CYP1B1Q16678 543 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 AP5B1Q2VPB7 878 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 KHDRBS2Q5VWX1 349 aaKnown RBP10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 STEAP4Q687X5 459 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR4C11Q6IEV9 310 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GPR180Q86V85 440 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 GPSM1Q86YR5 675 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PPIL6Q8IXY8 311 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 LAS2Q8IYD9 372 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TAGAPQ8N103 731 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 NKAPQ8N5F7 415 aaKnown RBP10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 SNX31Q8N9S9 440 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR7G3Q8NG95 312 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 OR1J4Q8NGS1 313 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TANKQ92844 425 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 TP53INP1Q96A56 240 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 VPS39Q96JC1 886 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ART5Q96L15 291 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 ROGDIQ9GZN7 287 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CXorf21Q9HAI6 301 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 PTBP2Q9UKA9 531 aaKnown RBP10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 CORO1CQ9ULV4 474 aaPredicted RBP10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MAPRE3Q9UPY8 281 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FREM1Q5H8C1 2179 aa10.76□□□□□ -0.69
SPTLC1P3-201ENST00000403408 MALRD1Q5VYJ5 2156 aa10.75□□□□□ -0.69
SPTLC1P3-201ENST00000403408 FAM95CA0A1B0GW59 222 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms