RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 PIWIL3Q7Z3Z3 882 aaKnown RBP12.31□□□□□ -0.44
NDEL1-203ENST00000402554 TMPRSS9Q7Z410 1059 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 SZRD1Q7Z422 152 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 B3GNT8Q7Z7M8 397 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 PATL1Q86TB9 770 aaKnown RBP12.31□□□□□ -0.44
NDEL1-203ENST00000402554 HIPK1Q86Z02 1210 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 DHRSXQ8N5I4 330 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 C19orf47Q8N9M1 422 aaKnown RBP12.31□□□□□ -0.44
NDEL1-203ENST00000402554 OR2T29Q8NH02 315 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 SUN3Q8TAQ9 357 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 SFXN5Q8TD22 340 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 KLHL6Q8WZ60 621 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 LZICQ8WZA0 190 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 TAMM41Q96BW9 452 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 MOAP1Q96BY2 351 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 TBC1D20Q96BZ9 403 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 LRRN3Q9H3W5 708 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 ZCCHC3Q9NUD5 404 aaKnown RBP12.31□□□□□ -0.44
NDEL1-203ENST00000402554 THUMPD1Q9NXG2 353 aaKnown RBP12.31□□□□□ -0.44
NDEL1-203ENST00000402554 MS4A12Q9NXJ0 267 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 KCMF1Q9P0J7 381 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 PCDHGB5Q9Y5G0 923 aa12.31□□□□□ -0.44
NDEL1-203ENST00000402554 MAGED1Q9Y5V3 778 aaPredicted RBP12.31□□□□□ -0.44
NDEL1-203ENST00000402554 FREM2Q5SZK8 3169 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 PMS2P1A4D2B8 440 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 M0QX08 132 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
NDEL1-203ENST00000402554 B4GAT1O43505 415 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 OPN1SWP03999 348 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 ALPLP05186 524 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 CDK4P11802 303 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 MAGEA8P43361 318 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 CLCN2P51788 898 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 KCNJ10P78508 379 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 CEBPEQ15744 281 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 SLC36A3Q495N2 470 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 OR52E8Q6IFG1 317 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 KRT80Q6KB66 452 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 BHLHB9Q6PI77 547 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 CYGBQ8WWM9 190 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 ZNF681Q96N22 645 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 RBM4BQ9BQ04 359 aaKnown RBP12.3□□□□□ -0.44
NDEL1-203ENST00000402554 RBM4Q9BWF3 364 aaKnown RBP12.3□□□□□ -0.44
NDEL1-203ENST00000402554 LYRM4Q9HD34 91 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 PRDM9Q9NQV7 894 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 IFT80Q9P2H3 777 aaPredicted RBP12.3□□□□□ -0.44
NDEL1-203ENST00000402554 PDP2Q9P2J9 529 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 DAPP1Q9UN19 280 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 MRPS2Q9Y399 296 aaKnown RBP12.3□□□□□ -0.44
NDEL1-203ENST00000402554 CEP295Q9C0D2 2601 aa12.3□□□□□ -0.44
NDEL1-203ENST00000402554 A6NHS1 94 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 SLC9B1P1A6NJY1 282 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 TMEM229AB2RXF0 380 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 D6RAR5 112 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 HMGN4O00479 90 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 TNFAIP8O95379 198 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 SNAP29O95721 258 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 THRBP10828 461 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 CAPGP40121 348 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 PPM1FP49593 454 aaPredicted RBP12.29□□□□□ -0.44
NDEL1-203ENST00000402554 ANXA11P50995 505 aaKnown RBP12.29□□□□□ -0.44
NDEL1-203ENST00000402554 MYBPC1Q00872 1141 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 DUSP2Q05923 314 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 IFI44LQ53G44 452 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 ZC3H12BQ5HYM0 836 aaKnown RBP12.29□□□□□ -0.44
NDEL1-203ENST00000402554 SHQ1Q6PI26 577 aaKnown RBP12.29□□□□□ -0.44
NDEL1-203ENST00000402554 RBM44Q6ZP01 1051 aaKnown RBP12.29□□□□□ -0.44
NDEL1-203ENST00000402554 USP53Q70EK8 1073 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 TMEM179BQ7Z7N9 219 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 SAMD14Q8IZD0 417 aaPredicted RBP12.29□□□□□ -0.44
NDEL1-203ENST00000402554 ST13P4Q8IZP2 240 aaPredicted RBP12.29□□□□□ -0.44
NDEL1-203ENST00000402554 OR6C4Q8NGE1 309 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 OR56A1Q8NGH5 318 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 SPPL2AQ8TCT8 520 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 SLC38A5Q8WUX1 472 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 RAB8BQ92930 207 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 MAGED4Q96JG8 741 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 C7orf34Q96L11 122 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 C10orf90Q96M02 699 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 DEPDC7Q96QD5 511 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 GFM1Q96RP9 751 aaKnown RBP12.29□□□□□ -0.44
NDEL1-203ENST00000402554 OSBPL10Q9BXB5 764 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 FAM60AQ9NP50 221 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 USE1Q9NZ43 259 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 PADI2Q9Y2J8 665 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 SLC22A7Q9Y694 548 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 U3KQV3 271 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 SPACA6W5XKT8 324 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 UNC13CQ8NB66 2214 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 A0A1W2PS29 197 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 TMEM247A6NEH6 219 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 TRABD2BA6NFA1 517 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 PLOD2O00469 737 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 SMNDC1O75940 238 aaKnown RBP eCLIP12.29□□□□□ -0.44
NDEL1-203ENST00000402554 C9P02748 559 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 ALBP02768 609 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 BCHEP06276 602 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 FHP07954 510 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 TFPTP0C1Z6 253 aa12.29□□□□□ -0.44
NDEL1-203ENST00000402554 MYF6P23409 242 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms