RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 PRKYO43930 277 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 IFNA16P05015 189 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 CCL5P13501 91 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 CSF2RAP15509 400 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 HBA1P69905 142 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 NTRK2Q16620 822 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 ZNF628Q5EBL2 1059 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 TMEM150AQ86TG1 271 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 RBM45Q8IUH3 476 aaKnown RBP16.19■□□□□ 0.18
PTPRA-205ENST00000399903 MRPS31Q92665 395 aaKnown RBP16.19■□□□□ 0.18
PTPRA-205ENST00000399903 MARC2Q969Z3 335 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 RANBP3Q9H6Z4 567 aaPredicted RBP16.19■□□□□ 0.18
PTPRA-205ENST00000399903 KDELR3O43731 214 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 MTX2O75431 263 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 CLDN11O75508 207 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 PCGF2P35227 344 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 ALDH9A1P49189 494 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 CHRNA6Q15825 494 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 TNFAIP8L2Q6P589 184 aaPredicted RBP16.19■□□□□ 0.18
PTPRA-205ENST00000399903 ZNF782Q6ZMW2 699 aaPredicted RBP16.19■□□□□ 0.18
PTPRA-205ENST00000399903 SRFBP1Q8NEF9 429 aaKnown RBP16.19■□□□□ 0.18
PTPRA-205ENST00000399903 DUSP18Q8NEJ0 188 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 OR52I1Q8NGK6 324 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 GEMIN6Q8WXD5 167 aaKnown RBP16.19■□□□□ 0.18
PTPRA-205ENST00000399903 UFD1Q92890 307 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 SLC6A18Q96N87 628 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 ZFP3Q96NJ6 502 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 ASIC5Q9NY37 505 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 IL17CQ9P0M4 197 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 CKAP5Q14008 2032 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 A0A1B0GVM2 712 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 TOR1AO14656 332 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 PRAMEF4O60810 478 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 MPC2O95563 127 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 CH25HO95992 272 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 GABRR2P28476 465 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 ABRQ12979 859 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 PRAMEF9Q5VWM5 478 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 FTMTQ8N4E7 242 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 OR2T35Q8NGX2 323 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 NLNQ9BYT8 704 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 PPP1R3EQ9H7J1 279 aa16.19■□□□□ 0.18
PTPRA-205ENST00000399903 COL4A4P53420 1690 aaPredicted RBP16.18■□□□□ 0.18
PTPRA-205ENST00000399903 A0A1W2PPL8 197 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 C5orf58C9J3I9 102 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 SIGLEC5O15389 551 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 HOXA2O43364 376 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 RGS11O94810 467 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 ITGB7P26010 798 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 ATP12AP54707 1039 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 SIGLEC14Q08ET2 396 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 ADAM15Q13444 863 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 SEC23BQ15437 767 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 CLEC12AQ5QGZ9 265 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 DCST1Q5T197 706 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 CEACAM20Q6UY09 585 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 LAS2Q8IYD9 372 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 VWCEQ96DN2 955 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 COQ10AQ96MF6 247 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.18■□□□□ 0.18
PTPRA-205ENST00000399903 FOLH1BQ9HBA9 442 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 ZFP64Q9NPA5 681 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 TEX13CA0A0J9YWL9 993 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 HEPACAM2A8MVW5 462 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 M0R233 179 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 DVL2O14641 736 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 HRO43593 1189 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 MTRF1O75570 445 aaKnown RBP16.18■□□□□ 0.18
PTPRA-205ENST00000399903 TPOP07202 933 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 PTNP21246 168 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 NUP62P37198 522 aaPredicted RBP16.18■□□□□ 0.18
PTPRA-205ENST00000399903 RTL4Q6ZR62 310 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 LMNTD1Q8N9Z9 388 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 COQ8AQ8NI60 647 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 GPR137Q96N19 417 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 FNIP2Q9P278 1114 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 PCDHGB7Q9Y5F8 929 aa16.18■□□□□ 0.18
PTPRA-205ENST00000399903 CHURC1-FNTBB4DL54 471 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 RAB36O95755 333 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 ELK1P19419 428 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 EVX1P49640 407 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 ZXDCQ2QGD7 858 aaPredicted RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 TUSC1Q2TAM9 212 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 LGALSLQ3ZCW2 172 aaPredicted RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 SLC39A5Q6ZMH5 540 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 GPR155Q7Z3F1 870 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 SENP5Q96HI0 755 aaPredicted RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 TMEM175Q9BSA9 504 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 KLF16Q9BXK1 252 aaPredicted RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 OR51J1Q9H342 316 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 ENOPH1Q9UHY7 261 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 ENPP4Q9Y6X5 453 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 RPL35P42766 123 aaKnown RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 BDKRB1P46663 353 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 CCR6P51684 374 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 LSM11P83369 360 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 HSF2Q03933 536 aa16.17■□□□□ 0.18
PTPRA-205ENST00000399903 ZNF791Q3KP31 576 aaPredicted RBP16.17■□□□□ 0.18
PTPRA-205ENST00000399903 LSM14AQ8ND56 463 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms