RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 UGT2B10P36537 528 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 IFNGR2P38484 337 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC19A1P41440 591 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 MAP2K4P45985 399 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GANABQ14697 944 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SYPL1Q16563 259 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TMEM201Q5SNT2 666 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FAM180BQ6P0A1 224 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 KIAA1324Q6UXG2 1013 aaKnown RBP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CCDC116Q8IYX3 515 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 STX19Q8N4C7 294 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ZNF655Q8N720 491 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TOR1AIP2Q8NFQ8 470 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FNDC8Q8TC99 324 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TANKQ92844 425 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 HMG20AQ9NP66 347 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 POT1Q9NUX5 634 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FBXW2Q9UKT8 454 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 MMP17Q9ULZ9 603 aa16.7■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PLXND1Q9Y4D7 1925 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 LAMA2P24043 3122 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ANKRD33BA6NCL7 494 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PRAMEF26H0Y7S4 382 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 BTN3A3O00478 584 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ZSCAN9O15535 394 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CNOT3O75175 753 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TNFP01375 233 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 BMXP51813 675 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CLDN2P57739 230 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 BTN3A2P78410 334 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 DLX2Q07687 328 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 COL19A1Q14993 1142 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SPCS2Q15005 226 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC25A30Q5SVS4 291 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 MEDAGQ5VYS4 303 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLX4IPQ5VYV7 408 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FBXO42Q6P3S6 717 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CCDC81Q6ZN84 652 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PTCHD4Q6ZW05 846 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 VN1R4Q7Z5H5 301 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SMRP1Q8NCR6 262 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GTPBP3Q969Y2 492 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PRRC1Q96M27 445 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FNDC11Q9BVV2 318 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ACTRT3Q9BYD9 372 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 WDR12Q9GZL7 423 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GIN1Q9NXP7 522 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CLDND1Q9NY35 253 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 HEMK1Q9Y5R4 338 aaPredicted RBP16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SNX11Q9Y5W9 270 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 A3GALT2U3KPV4 340 aa16.69■□□□□ 0.26
HLA-DQB1-204ENST00000399084 KIR2DS5A0A0G2JLQ3 304 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 A0A0G2JNG1 304 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TRBV4-1A0A0J9YWV2 114 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PRAMEF27A3QJZ7 478 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 KIR2DS3K7RE56 304 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 OR10H3O60404 316 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 NDUFV2P19404 249 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CERS1P27544 350 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ACSL1P33121 698 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 AQP6Q13520 282 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 IRF3Q14653 427 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ZNF846Q147U1 533 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 KIR2DS5Q14953 304 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CYP27C1Q4G0S4 372 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RNLSQ5VYX0 342 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ABHD13Q7L211 337 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ABI3BPQ7Z7G0 1075 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CCDC103Q8IW40 242 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RBM12BQ8IXT5 1001 aaKnown RBP16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 NUP43Q8NFH3 380 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 OR8J1Q8NGP2 316 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FLVCR1-AS1Q8TAF5 88 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 PMM1Q92871 262 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 LGALS12Q96DT0 336 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 OR2A14Q96R47 310 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 OR2A5Q96R48 311 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GDF15Q99988 308 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GSDMCQ9BYG8 508 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 POLR2J3Q9H1A7 115 aaKnown RBP16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 LYRM4Q9HD34 91 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TBCCD1Q9NVR7 557 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 REV1Q9UBZ9 1251 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 A4GNTQ9UNA3 340 aa16.68■□□□□ 0.26
HLA-DQB1-204ENST00000399084 A0A1B0GVG6 124 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 C4orf51C9J302 202 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CLDN25C9JDP6 229 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 B3GALT2O43825 422 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CD36P16671 472 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CD72P21854 359 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 MAN2A2P49641 1150 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 MAPK10P53779 464 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RAB8AP61006 207 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TNFRSF17Q02223 184 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 LASP1Q14847 261 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 KLHL35Q6PF15 583 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 DEF8Q6ZN54 512 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SZRD1Q7Z422 152 aa16.67■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TRIM48Q8IWZ4 208 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms