RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 TBC1D17Q9HA65 648 aa14.27□□□□□ -0.12
CYLD-202ENST00000398568 PQLC2LA1A4F0 135 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 D6RAR5 112 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 PRRG1O14668 218 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 IRAK2O43187 625 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 PQBP1O60828 265 aaKnown RBP14.27□□□□□ -0.13
CYLD-202ENST00000398568 SNAPC5O75971 98 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 CLDN9O95484 217 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 ECDO95905 644 aaPredicted RBP14.27□□□□□ -0.13
CYLD-202ENST00000398568 PDYNP01213 254 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 FABP1P07148 127 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 PBX3P40426 434 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 RAB13P51153 203 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 AFF1P51825 1210 aaKnown RBP14.27□□□□□ -0.13
CYLD-202ENST00000398568 RPLP0P6Q8NHW5 317 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 ACOT12Q8WYK0 555 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 TRIM62Q9BVG3 475 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 DNTTIP1Q9H147 329 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 ACER3Q9NUN7 267 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 TMEM161AQ9NX61 479 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 TVP23BQ9NYZ1 205 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 TMEM5Q9Y2B1 443 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 GABRR3A8MPY1 467 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 MPTX1A8MV57 137 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 LRRTM2O43300 516 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 SGCEO43556 437 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 RP2O75695 350 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 OSMP13725 252 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 FGF9P31371 208 aaPredicted RBP14.27□□□□□ -0.13
CYLD-202ENST00000398568 CRATP43155 626 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 RGS4P49798 205 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 RAB8AP61006 207 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 LGALS3BPQ08380 585 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 TPBGQ13641 420 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 CTSL3PQ5NE16 218 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 TMEM201Q5SNT2 666 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 AFMIDQ63HM1 303 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 RAB11FIP2Q7L804 512 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 TMPRSS9Q7Z410 1059 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 ZER1Q7Z7L7 766 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 PAQR7Q86WK9 346 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 ZFP41Q8N8Y5 198 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 OR52I1Q8NGK6 324 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 NKX6-2Q9C056 277 aaPredicted RBP14.27□□□□□ -0.13
CYLD-202ENST00000398568 ZCCHC4Q9H5U6 513 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 CTSFQ9UBX1 484 aa14.27□□□□□ -0.13
CYLD-202ENST00000398568 PRKYO43930 277 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 ADAMTS4O75173 837 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 RASGRP1O95267 797 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 ACSL1P33121 698 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 XKP51811 444 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 LILRA4P59901 499 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 FGL2Q14314 439 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 LYPD4Q6UWN0 246 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 TMEM91Q6ZNR0 172 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 RNF165Q6ZSG1 346 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 CCDC36Q8IYA8 594 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 PPTC7Q8NI37 304 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 C10orf90Q96M02 699 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 FAM120CQ9NX05 1096 aaKnown RBP14.26□□□□□ -0.13
CYLD-202ENST00000398568 NKIRAS2Q9NYR9 191 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 RHCGQ9UBD6 479 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 SMIM28A0A1B0GU29 152 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 TRDV1A0A1B0GX56 115 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 TAPBPO15533 448 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 TLX2O43763 284 aaPredicted RBP14.26□□□□□ -0.13
CYLD-202ENST00000398568 HIST1H2AGP0C0S8 130 aaPredicted RBP14.26□□□□□ -0.13
CYLD-202ENST00000398568 ZNF806P0C7X5 589 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 HIST1H2ADP20671 130 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 CD9P21926 228 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 MC4RP32245 332 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 CENPAP49450 140 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 SRP9P49458 86 aaKnown RBP14.26□□□□□ -0.13
CYLD-202ENST00000398568 ZXDBP98169 803 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 RAB41Q5JT25 222 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 HIST2H2AA3Q6FI13 130 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 SBSNQ6UWP8 590 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 DBF4BQ8NFT6 615 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 TEX47Q8TBZ9 253 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 GEMIN6Q8WXD5 167 aaKnown RBP14.26□□□□□ -0.13
CYLD-202ENST00000398568 HIST1H2AHQ96KK5 128 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 HIST1H2AJQ99878 128 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 TREX2Q9BQ50 279 aaPredicted RBP14.26□□□□□ -0.13
CYLD-202ENST00000398568 TMED9Q9BVK6 235 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 EBPLQ9BY08 206 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 ESRP2Q9H6T0 727 aaKnown RBP14.26□□□□□ -0.13
CYLD-202ENST00000398568 CRTAC1Q9NQ79 661 aa14.26□□□□□ -0.13
CYLD-202ENST00000398568 SOD1P00441 154 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 TFP02787 698 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 HLA-DPB1P04440 258 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 PITPNBP48739 271 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 EPHA4P54764 986 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 GSG1Q2KHT4 349 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 MANEALQ5VSG8 457 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 PSAPL1Q6NUJ1 521 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 SLC27A4Q6P1M0 643 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 ZNF527Q8NB42 609 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 ATAD1Q8NBU5 361 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 NANPQ8TBE9 248 aa14.25□□□□□ -0.13
CYLD-202ENST00000398568 FOXJ1Q92949 421 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms