RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 GIPC3Q8TF64 312 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 UBTD2Q8WUN7 234 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 XAGE5Q8WWM1 108 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 ELMO1Q92556 727 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 COQ8BQ96D53 544 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 CERS2Q96G23 380 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 FOXN4Q96NZ1 517 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 HINT2Q9BX68 163 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 RNF26Q9BY78 433 aaPredicted RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 POTEKPQ9BYX7 375 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 TPSD1Q9BZJ3 242 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 ACSS1Q9NUB1 689 aaPredicted RBP6.29□□□□□ -1.4
SMCO1-201ENST00000397537 SPHK1Q9NYA1 384 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 DLL3Q9NYJ7 618 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 SLC7A8Q9UHI5 535 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 PCDHGB1Q9Y5G3 927 aa6.29□□□□□ -1.4
SMCO1-201ENST00000397537 A0A1B0GVL5 298 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 DDTLA6NHG4 134 aaPredicted RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 TUBAL3A6NHL2 446 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 TMEM189-UBE2V1I3L0A0 370 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 M0QZ24 198 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 SUPT3HO75486 399 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 STX11O75558 287 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 HRH2P25021 359 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 CYP2C18P33260 490 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 NAA10P41227 235 aaPredicted RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 ARRB1P49407 418 aaPredicted RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 CYP2J2P51589 502 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 PPIAP62937 165 aaKnown RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 PLOD1Q02809 727 aaPredicted RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 UBE2V1Q13404 147 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 EPHA10Q5JZY3 1008 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 C6orf183Q5T699 404 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 ZNF470Q6ECI4 717 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 SIGIRRQ6IA17 410 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 NADSYN1Q6IA69 706 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 TPRG1Q6ZUI0 275 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 PATL1Q86TB9 770 aaKnown RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 FBXL16Q8N461 479 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 PARP16Q8N5Y8 322 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 PQLC3Q8N755 202 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 DTX3LQ8TDB6 740 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 TMEM125Q96AQ2 219 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 TMA16Q96EY4 203 aaKnown RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 PPP1R16AQ96I34 528 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 KAZALD1Q96I82 304 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 SLC22A12Q96S37 553 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 SELENOSQ9BQE4 189 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 OPN3Q9H1Y3 402 aaPredicted RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 TPK1Q9H3S4 243 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 MRPS30Q9NP92 439 aaKnown RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 CNGB3Q9NQW8 809 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 SMOXQ9NWM0 555 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 CLEC5AQ9NY25 188 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 TXNDC16Q9P2K2 825 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 NDRG3Q9UGV2 375 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 FZD4Q9ULV1 537 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 LTN1O94822 1766 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 SCN11AQ9UI33 1791 aa6.28□□□□□ -1.4
SMCO1-201ENST00000397537 FAM208AQ9UK61 1670 aaKnown RBP6.28□□□□□ -1.4
SMCO1-201ENST00000397537 DPPA5A6NC42 116 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 WASHC1A8K0Z3 465 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 GOLGA8RI6L899 631 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 J3QR06 171 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 RAD51BO15315 384 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 SCN2BO60939 215 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 ATP6AP2O75787 350 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 CLDN7O95471 211 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 CALM1P0DP23 149 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 CALM2P0DP24 149 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 CALM3P0DP25 149 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 SLURP2P0DP57 97 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 FCGR1AP12314 374 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 M6PRP20645 277 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 GATA3P23771 443 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 HNRNPH3P31942 346 aaKnown RBP6.27□□□□□ -1.41
SMCO1-201ENST00000397537 RABGGTBP53611 331 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 NAPAP54920 295 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 CLDN15P56746 228 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 CYP4F2P78329 520 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 S100A12P80511 92 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 FPGSQ05932 587 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 SMARCB1Q12824 385 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 UGT3A2Q3SY77 523 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 PDCD4Q53EL6 469 aaKnown RBP6.27□□□□□ -1.41
SMCO1-201ENST00000397537 TREML2Q5T2D2 321 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 TMEM225Q6GV28 225 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 CAPN13Q6MZZ7 669 aaPredicted RBP6.27□□□□□ -1.41
SMCO1-201ENST00000397537 RGMBQ6NW40 437 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 ANKRD54Q6NXT1 300 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 METTL2BQ6P1Q9 378 aaKnown RBP6.27□□□□□ -1.41
SMCO1-201ENST00000397537 LYPD4Q6UWN0 246 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 VSTM1Q6UX27 236 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 WASH2PQ6VEQ5 465 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 HSDL2Q6YN16 418 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 CDHR3Q6ZTQ4 885 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 TMPRSS11FQ6ZWK6 438 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 CYP4Z1Q86W10 505 aa6.27□□□□□ -1.41
SMCO1-201ENST00000397537 RBM45Q8IUH3 476 aaKnown RBP6.27□□□□□ -1.41
SMCO1-201ENST00000397537 C12orf76Q8N812 135 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms