RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CDKN2CP42773 168 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 UQCRFS1P47985 274 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 NCBP2P52298 156 aaKnown RBP eCLIP12.41□□□□□ -0.42
SEC13-209ENST00000397117 MAT1AQ00266 395 aaKnown RBP12.41□□□□□ -0.42
SEC13-209ENST00000397117 ERV3-1Q14264 604 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 MPEG1Q2M385 716 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 SAMD4BQ5PRF9 694 aaKnown RBP12.41□□□□□ -0.42
SEC13-209ENST00000397117 NANOGP8Q6NSW7 305 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 FBXW8Q8N3Y1 598 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 GALNT6Q8NCL4 622 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 OR4K14Q8NGD5 310 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 OR51Q1Q8NH59 317 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 TANKQ92844 425 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 PEX11GQ96HA9 241 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 CLPTM1LQ96KA5 538 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 THUMPD3Q9BV44 507 aaKnown RBP12.41□□□□□ -0.42
SEC13-209ENST00000397117 ULBP3Q9BZM4 244 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 NANOGQ9H9S0 305 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 NEUROD4Q9HD90 331 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 ACSS1Q9NUB1 689 aaPredicted RBP12.41□□□□□ -0.42
SEC13-209ENST00000397117 TAS2R9Q9NYW1 312 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 VAPAQ9P0L0 249 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 TMEM181Q9P2C4 612 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 ZNF282Q9UDV7 671 aaPredicted RBP12.41□□□□□ -0.42
SEC13-209ENST00000397117 MAU2Q9Y6X3 613 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 SPTBP11277 2137 aa12.41□□□□□ -0.42
SEC13-209ENST00000397117 WASHC1A8K0Z3 465 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 FAM227AF5H4B4 570 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 CYR61O00622 381 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 CLDN4O14493 209 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 CIB2O75838 187 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 PDE5AO76074 875 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 PDGFAP04085 211 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 CSNK2A2P19784 350 aaPredicted RBP12.4□□□□□ -0.42
SEC13-209ENST00000397117 FBLP22087 321 aaKnown RBP12.4□□□□□ -0.42
SEC13-209ENST00000397117 PPP2R1BP30154 601 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 MPIP34949 423 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 FEN1P39748 380 aaKnown RBP12.4□□□□□ -0.42
SEC13-209ENST00000397117 GCGRP47871 477 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 OR1D4P47884 311 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 HBA1P69905 142 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 HSPB3Q12988 150 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 C1orf189Q5VU69 101 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 PWWP2BQ6NUJ5 590 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 GALNT11Q8NCW6 608 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 OR8J3Q8NGG0 315 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 CLIP3Q96DZ5 547 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 RNF31Q96EP0 1072 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 ANKRD27Q96NW4 1050 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 ZNF304Q9HCX3 659 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 AP3M1Q9Y2T2 418 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 PRRC2CQ9Y520 2896 aaKnown RBP12.4□□□□□ -0.42
SEC13-209ENST00000397117 PCDHGA6Q9Y5G7 932 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 SNX8Q9Y5X2 465 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 EVPLLA8MZ36 301 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 ZCCHC18P0CG32 403 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 C8orf89P0DMQ9 161 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 FGF5P12034 268 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 GNLYP22749 145 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 GPC1P35052 558 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 SOAT1P35610 550 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 FRKP42685 505 aaPredicted RBP12.4□□□□□ -0.42
SEC13-209ENST00000397117 XCR1P46094 333 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 XKP51811 444 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 MTPNP58546 118 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 DSG2Q14126 1118 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 MLC1Q15049 377 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 SYT16Q17RD7 645 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 SPDYE7PQ495Y7 208 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 GTDC1Q4AE62 458 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 RUNDC3AQ59EK9 446 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 RABL3Q5HYI8 236 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 C6orf163Q5TEZ5 329 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 RHBDD2Q6NTF9 364 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 APLFQ8IW19 511 aaPredicted RBP12.4□□□□□ -0.42
SEC13-209ENST00000397117 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 ZNF595Q8IYB9 648 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 CCDC116Q8IYX3 515 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 RNF148Q8N7C7 305 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 GOT1L1Q8NHS2 421 aaPredicted RBP12.4□□□□□ -0.42
SEC13-209ENST00000397117 TMEM125Q96AQ2 219 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 TBC1D20Q96BZ9 403 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 CNRIP1Q96F85 164 aaPredicted RBP12.4□□□□□ -0.42
SEC13-209ENST00000397117 AMDHD1Q96NU7 426 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 ECSITQ9BQ95 431 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 RBCK1Q9BYM8 510 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 TRIM8Q9BZR9 551 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 SLAMF7Q9NQ25 335 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 SLC6A13Q9NSD5 602 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 SLC25A37Q9NYZ2 338 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 ABCD2Q9UBJ2 740 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 TRPC4Q9UBN4 977 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 KCND3Q9UK17 655 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 PACSIN3Q9UKS6 424 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 MAP4K5Q9Y4K4 846 aa12.4□□□□□ -0.42
SEC13-209ENST00000397117 TRBV5-3A0A0A0MS03 114 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 CDC14CA4D256 554 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 MYO1GB0I1T2 1018 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 B4GALT2O60909 372 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 CREG1O75629 220 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms