RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TBL3Q12788 808 aaKnown RBP13.51□□□□□ -0.25
SEC13-208ENST00000397109 SPRED3Q2MJR0 410 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 KRTCAP3Q53RY4 240 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 NDUFAF5Q5TEU4 345 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 GFRALQ6UXV0 394 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 ZNF227Q86WZ6 799 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 POGLUT1Q8NBL1 392 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 OR4K14Q8NGD5 310 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 NUBPLQ8TB37 319 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 ASB15Q8WXK1 588 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 RIT1Q92963 219 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 PPWD1Q96BP3 646 aaKnown RBP13.51□□□□□ -0.25
SEC13-208ENST00000397109 NSL1Q96IY1 281 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 RILPQ96NA2 401 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 RAB3IPQ96QF0 476 aaPredicted RBP13.51□□□□□ -0.25
SEC13-208ENST00000397109 MID1IP1Q9NPA3 183 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 TIMMDC1Q9NPL8 285 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 HPF1Q9NWY4 346 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 TEX10Q9NXF1 929 aaPredicted RBP13.51□□□□□ -0.25
SEC13-208ENST00000397109 SEC14L3Q9UDX4 400 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 PSME2Q9UL46 239 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 ERVK-11Q9UQG0 969 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 OSGIN2Q9Y236 505 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 SETXQ7Z333 2677 aaKnown RBP13.51□□□□□ -0.25
SEC13-208ENST00000397109 ICE1Q9Y2F5 2266 aa13.51□□□□□ -0.25
SEC13-208ENST00000397109 C1orf226A1L170 272 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 SERTM1A2A2V5 107 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 KLRC4-KLRK1H3BQV0 150 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 ZNF195O14628 629 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 PGRMC2O15173 223 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 HDAC3O15379 428 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 IGKV3-11P04433 115 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 STSP08842 583 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 MST1P26927 711 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 ADSLP30566 484 aaPredicted RBP13.5□□□□□ -0.25
SEC13-208ENST00000397109 PMP22Q01453 160 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 RBPJQ06330 500 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 MPEG1Q2M385 716 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.5□□□□□ -0.256e-6■□□□□ 8.6
SEC13-208ENST00000397109 C4orf17Q53FE4 359 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 EPGNQ6UW88 154 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 RNF165Q6ZSG1 346 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.5□□□□□ -0.25
SEC13-208ENST00000397109 C1orf52Q8N6N3 182 aaKnown RBP13.5□□□□□ -0.25
SEC13-208ENST00000397109 ZNF321PQ8N8H1 164 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 CHTF18Q8WVB6 975 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 FRMD6Q96NE9 622 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 PSMG3-AS1Q96PY0 264 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 RASL10BQ96S79 203 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 FAIM2Q9BWQ8 316 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 LRMDAQ9H2I8 198 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 TNFRSF12AQ9NP84 129 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 TRIM33Q9UPN9 1127 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 PCDHA9Q9Y5H5 950 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 COL12A1Q99715 3063 aa13.5□□□□□ -0.25
SEC13-208ENST00000397109 A0A1B0GUH1 482 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 OR6C76A6NM76 312 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 TRPC5OSA6NMA1 111 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 WASHC1A8K0Z3 465 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 WWP2O00308 870 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 SLC22A2O15244 555 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 LYPLA1O75608 230 aaPredicted RBP13.49□□□□□ -0.25
SEC13-208ENST00000397109 KITP10721 976 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 MNAT1P51948 309 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 PER3P56645 1201 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 ZNF267Q14586 743 aaPredicted RBP13.49□□□□□ -0.25
SEC13-208ENST00000397109 SPIN4Q56A73 249 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 TCHHL1Q5QJ38 904 aaPredicted RBP13.49□□□□□ -0.25
SEC13-208ENST00000397109 OPN5Q6U736 354 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 SLC29A4Q7RTT9 530 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 C10orf67Q8IYJ2 551 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 SLC15A4Q8N697 577 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 TM4SF18Q96CE8 201 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 SGCZQ96LD1 299 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 HBEGFQ99075 208 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 CNPPD1Q9BV87 410 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 ZNF395Q9H8N7 513 aaPredicted RBP13.49□□□□□ -0.25
SEC13-208ENST00000397109 LIN28AQ9H9Z2 209 aaKnown RBP13.49□□□□□ -0.25
SEC13-208ENST00000397109 MCM8Q9UJA3 840 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 ERRFI1Q9UJM3 462 aaPredicted RBP13.49□□□□□ -0.25
SEC13-208ENST00000397109 CROCCQ5TZA2 2017 aa13.49□□□□□ -0.25
SEC13-208ENST00000397109 GOLGA8QA0A0J9YX86 632 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 GOLGA8OA6NCC3 632 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 GOLGA8NF8WBI6 632 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 AZIN1O14977 448 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 CRCPO75575 148 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 T-ENOLP0DO92 83 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 UROSP10746 265 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 NQO1P15559 274 aaKnown RBP13.48□□□□□ -0.25
SEC13-208ENST00000397109 PORP16435 677 aaPredicted RBP13.48□□□□□ -0.25
SEC13-208ENST00000397109 IDH3AP50213 366 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 XKP51811 444 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 KCNK10P57789 538 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 ERVK-8P63133 956 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 ACSM2AQ08AH3 577 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 PIGGQ5H8A4 983 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 SH2D4BQ5SQS7 431 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 C6orf163Q5TEZ5 329 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 KANK2Q63ZY3 851 aa13.48□□□□□ -0.25
SEC13-208ENST00000397109 ACSM2BQ68CK6 577 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms