RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FUT5Q11128 374 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 NXPE4Q6UWF7 544 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 CLDN22Q8N7P3 220 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 TM4SF18Q96CE8 201 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 MRGPRX3Q96LB0 322 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 FRMD6Q96NE9 622 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 QRSL1Q9H0R6 528 aaKnown RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 RPL36Q9Y3U8 105 aaKnown RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 GTPBP1O00178 669 aaKnown RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 ZNF780AO75290 641 aaPredicted RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 CDK5Q00535 292 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 MESP2Q0VG99 397 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 GINS1Q14691 196 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 FAM83HQ6ZRV2 1179 aaPredicted RBP13.17□□□□□ -0.3
NUP98-204ENST00000397004 RFPL4BQ6ZWI9 263 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 SLC9B2Q86UD5 537 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 TCEAL8Q8IYN2 117 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 GALNT6Q8NCL4 622 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 OR6T1Q8NGN1 323 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 TMCC3Q9ULS5 477 aa13.17□□□□□ -0.3
NUP98-204ENST00000397004 A0A1W2PS29 197 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 CCDC182A6NF36 153 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 TEX28O15482 410 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 ATG13O75143 517 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 PRKRAO75569 313 aaKnown RBP13.16□□□□□ -0.3
NUP98-204ENST00000397004 CCNYL3P0C7X3 344 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 DDX5P17844 614 aaKnown RBP13.16□□□□□ -0.3
NUP98-204ENST00000397004 SDHBP21912 280 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 PCBP4P57723 403 aaKnown RBP13.16□□□□□ -0.3
NUP98-204ENST00000397004 SLC7A9P82251 487 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 FAPQ12884 760 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 PYDC2Q56P42 97 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 C6orf120Q7Z4R8 191 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 FAM129CQ86XR2 697 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 RIPOR3Q96MK2 946 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 F2RL3Q96RI0 385 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 MRPL9Q9BYD2 267 aaKnown RBP13.16□□□□□ -0.3
NUP98-204ENST00000397004 AICDAQ9GZX7 198 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 MRPL17Q9NRX2 175 aaKnown RBP13.16□□□□□ -0.3
NUP98-204ENST00000397004 GIMAP4Q9NUV9 329 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 TOR4AQ9NXH8 423 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 COMMD3Q9UBI1 195 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 PRKAB1Q9Y478 270 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 NEDD8-MDP1E9PL57 170 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 TMPRSS11DO60235 418 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 EVI2BP34910 448 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 MLLT3P42568 568 aaPredicted RBP13.16□□□□□ -0.3
NUP98-204ENST00000397004 SYCE2Q6PIF2 218 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 ARIH2OSQ8N7S6 290 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 HCAR2Q8TDS4 363 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 ZNF354BQ96LW1 612 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 TRPV5Q9NQA5 729 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 SEMA3GQ9NS98 782 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 TEX10Q9NXF1 929 aaPredicted RBP13.16□□□□□ -0.3
NUP98-204ENST00000397004 WASH3PC4AMC7 463 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 LANCL1O43813 399 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 TSPAN19P0C672 248 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 HTR2BP41595 481 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 SLC6A11P48066 632 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 ZNF155Q12901 538 aaPredicted RBP13.16□□□□□ -0.3
NUP98-204ENST00000397004 GPR19Q15760 415 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 PLK5Q496M5 336 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 ZDHHC20Q5W0Z9 365 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 QSOX2Q6ZRP7 698 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 TRILQ7L0X0 811 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 TMEM145Q8NBT3 493 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 SLC5A11Q8WWX8 675 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 ZG16BQ96DA0 208 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 POLDIP3Q9BY77 421 aaKnown RBP13.16□□□□□ -0.3
NUP98-204ENST00000397004 SLA2Q9H6Q3 261 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 HCFC1R1Q9NWW0 138 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 NLKQ9UBE8 527 aa13.16□□□□□ -0.3
NUP98-204ENST00000397004 FAAHO00519 579 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 GNRH1P01148 92 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 HLA-DQB1P01920 261 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 BSGP35613 385 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 SLC9A3P48764 834 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 CNIH2Q6PI25 160 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 CASP12Q6UXS9 341 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 LIPIQ6XZB0 460 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 DEFB128Q7Z7B8 93 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 C11orf74Q86VG3 221 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 C1GALT1C1Q96EU7 318 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 ATF6BQ99941 703 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 CUEDC1Q9NWM3 386 aaPredicted RBP13.15□□□□□ -0.3
NUP98-204ENST00000397004 CHD9Q3L8U1 2897 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 MYL12BO14950 172 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 YES1P07947 543 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 EPHB3P54753 998 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 P2RX3P56373 397 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 CTBP2P56545 445 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 CD200R1LQ6Q8B3 271 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 GDPD1Q8N9F7 314 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 DTX3Q8N9I9 347 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 IL17RCQ8NAC3 791 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 ZFAND1Q8TCF1 268 aa13.15□□□□□ -0.3
NUP98-204ENST00000397004 KLK6Q92876 244 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms