RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 ZNF615Q8N8J6 731 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 RHEBL1Q8TAI7 183 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 WDR20Q8TBZ3 569 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 FBF1Q8TES7 1133 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 TP53INP1Q96A56 240 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 UGT2B28Q9BY64 529 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 SNX15Q9NRS6 342 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 RNF11Q9Y3C5 154 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 ANGPTL3Q9Y5C1 460 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 NPFFR2Q9Y5X5 522 aa12.14□□□□□ -0.47
RPA3-202ENST00000396682 MBD3L4A6NDZ8 208 aaPredicted RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 MBD3L3A6NE82 208 aaPredicted RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 FAM187AA6NFU0 413 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 MBD3L5A6NJ08 208 aaPredicted RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 CD8B2A6NJW9 211 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 TP53I11O14683 189 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 UGDHO60701 494 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 SNX4O95219 450 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 ATE1O95260 518 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 SIX3O95343 332 aaPredicted RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 BMP7P18075 431 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 SOX18P35713 384 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 PIK3CGP48736 1102 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 AGFG1P52594 562 aaKnown RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 GTF2H2Q13888 395 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 PCBP2Q15366 365 aaKnown RBP eCLIP12.13□□□□□ -0.47
RPA3-202ENST00000396682 TRADDQ15628 312 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 EIPR1Q53HC9 387 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 NHSL2Q5HYW2 709 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 DESI1Q6ICB0 168 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 OR52E8Q6IFG1 317 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 GTF2H2CQ6P1K8 395 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 GOLGA7Q7Z5G4 137 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 NUDT13Q86X67 352 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 GALNT12Q8IXK2 581 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 PRR22Q8IZ63 422 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 MMP21Q8N119 569 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 L3MBTL4Q8NA19 623 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 GOT1L1Q8NHS2 421 aaPredicted RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 MBD3L2Q8NHZ7 208 aaPredicted RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 HSPBAP1Q96EW2 488 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 WDYHV1Q96HA8 205 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 GPR78Q96P69 363 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 SECISBP2Q96T21 854 aaKnown RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 EPB41L4BQ9H329 900 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 IPPKQ9H8X2 491 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 PSD3Q9NYI0 1048 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 JKAMPQ9P055 326 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 RNF14Q9UBS8 474 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 MTRF1LQ9UGC7 380 aaKnown RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 CAMK2AQ9UQM7 478 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 DTX4Q9Y2E6 619 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 ACOT9Q9Y305 439 aa12.13□□□□□ -0.47
RPA3-202ENST00000396682 NSD1Q96L73 2696 aaPredicted RBP12.13□□□□□ -0.47
RPA3-202ENST00000396682 TUBAL3A6NHL2 446 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 SYCE1LA8MT33 242 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 CAPN14A8MX76 684 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 FOXE1O00358 373 aaPredicted RBP12.12□□□□□ -0.47
RPA3-202ENST00000396682 IL2RAP01589 272 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 C2P06681 752 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 EPXP11678 715 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 GFAPP14136 432 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 S1PR1P21453 382 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 ABCD3P28288 659 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 PTPN6P29350 595 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 MAGEA4P43358 317 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 MASP1P48740 699 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 DGKQP52824 942 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 NAGLUP54802 743 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 ALDH18A1P54886 795 aaKnown RBP12.12□□□□□ -0.47
RPA3-202ENST00000396682 PLTPP55058 493 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 PHEXP78562 749 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 WIPI1Q5MNZ9 446 aaPredicted RBP12.12□□□□□ -0.47
RPA3-202ENST00000396682 ZDHHC24Q6UX98 284 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 PACS2Q86VP3 889 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 PM20D2Q8IYS1 436 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 C9orf106Q8NAJ2 232 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 SPATA4Q8NEY3 305 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 LINC01560Q8TB33 94 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 FBXO25Q8TCJ0 367 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 REPS1Q96D71 796 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 LRRC46Q96FV0 321 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 TMEM41AQ96HV5 264 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 TRIB1Q96RU8 372 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 OR10A5Q9H207 317 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 WDR41Q9HAD4 459 aa12.12□□□□□ -0.47
RPA3-202ENST00000396682 FOXD3Q9UJU5 478 aaPredicted RBP12.12□□□□□ -0.47
RPA3-202ENST00000396682 A0A087X1B8 175 aa12.11□□□□□ -0.47
RPA3-202ENST00000396682 OR7A17O14581 309 aa12.11□□□□□ -0.47
RPA3-202ENST00000396682 GNB5O14775 395 aa12.11□□□□□ -0.47
RPA3-202ENST00000396682 SEMA3DO95025 777 aa12.11□□□□□ -0.47
RPA3-202ENST00000396682 RAF1P04049 648 aa12.11□□□□□ -0.47
RPA3-202ENST00000396682 ABCB1P08183 1280 aaPredicted RBP12.11□□□□□ -0.47
RPA3-202ENST00000396682 GPX3P22352 226 aa12.11□□□□□ -0.47
RPA3-202ENST00000396682 CTSSP25774 331 aa12.11□□□□□ -0.47
RPA3-202ENST00000396682 PIK3R1P27986 724 aa12.11□□□□□ -0.47
RPA3-202ENST00000396682 STX2P32856 288 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms