RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SDHDO14521 159 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 SLC28A2O43868 658 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF354AO60765 605 aaPredicted RBP15.35■□□□□ 0.05
CXCL1-201ENST00000395761 ITGA10O75578 1167 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 MAPK1P28482 360 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 MRPS35P82673 323 aaKnown RBP15.35■□□□□ 0.05
CXCL1-201ENST00000395761 EMX2Q04743 252 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 MAP4K2Q12851 820 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 DUSP8Q13202 625 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 PTGR1Q14914 329 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF169Q14929 603 aaPredicted RBP15.35■□□□□ 0.05
CXCL1-201ENST00000395761 EXOSC7Q15024 291 aaKnown RBP15.35■□□□□ 0.05
CXCL1-201ENST00000395761 TLR1Q15399 786 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 CEBPEQ15744 281 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 SMU1Q2TAY7 513 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 TRMT12Q53H54 448 aaKnown RBP15.35■□□□□ 0.05
CXCL1-201ENST00000395761 PRR30Q53SZ7 412 aaPredicted RBP15.35■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF385BQ569K4 471 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF628Q5EBL2 1059 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 SPINK14Q6IE38 97 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 RNF111Q6ZNA4 994 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 CPLX4Q7Z7G2 160 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF605Q86T29 641 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF615Q8N8J6 731 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 OR5L2Q8NGL0 311 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 OR9A2Q8NGT5 310 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 BBS4Q96RK4 519 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 UTP23Q9BRU9 249 aaKnown RBP15.35■□□□□ 0.05
CXCL1-201ENST00000395761 OR10A5Q9H207 317 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 REEP4Q9H6H4 257 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 NPHS2Q9NP85 383 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 GIMAP4Q9NUV9 329 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 KLHL14Q9P2G3 628 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF639Q9UID6 485 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 ENTPD4Q9Y227 616 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 PCDHGA10Q9Y5H3 936 aa15.35■□□□□ 0.05
CXCL1-201ENST00000395761 TTLL8A6PVC2 850 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 FCHO1O14526 889 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 PCSK2P16519 638 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 TRHRP34981 398 aaPredicted RBP15.34■□□□□ 0.05
CXCL1-201ENST00000395761 ASMTP46597 345 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 IDH3AP50213 366 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 AQP5P55064 265 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 DIO3P55073 304 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 OC90Q02509 493 aaPredicted RBP15.34■□□□□ 0.05
CXCL1-201ENST00000395761 PDE7AQ13946 482 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 OR1C1Q15619 314 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 MPEG1Q2M385 716 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 LARP4Q71RC2 724 aaKnown RBP eCLIP15.34■□□□□ 0.05
CXCL1-201ENST00000395761 PIGWQ7Z7B1 504 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 ZNF227Q86WZ6 799 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 SAMD14Q8IZD0 417 aaPredicted RBP15.34■□□□□ 0.05
CXCL1-201ENST00000395761 VWA5B2Q8N398 1253 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 KRTCAP2Q8N6L1 136 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 RFWD2Q8NHY2 731 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 NUBPLQ8TB37 319 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 ACTRT2Q8TDY3 377 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 KAT2AQ92830 837 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 CIDECQ96AQ7 238 aaPredicted RBP15.34■□□□□ 0.05
CXCL1-201ENST00000395761 CTHRC1Q96CG8 243 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 GAL3ST4Q96RP7 486 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 CCT8L2Q96SF2 557 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 CCDC28BQ9BUN5 200 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 HES7Q9BYE0 225 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 WDR55Q9H6Y2 383 aaPredicted RBP15.34■□□□□ 0.05
CXCL1-201ENST00000395761 ANKRA2Q9H9E1 313 aa15.34■□□□□ 0.05
CXCL1-201ENST00000395761 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.34■□□□□ 0.05
CXCL1-201ENST00000395761 EIF3LQ9Y262 564 aaKnown RBP15.34■□□□□ 0.05
CXCL1-201ENST00000395761 YARS2Q9Y2Z4 477 aaKnown RBP15.34■□□□□ 0.05
CXCL1-201ENST00000395761 TRAV17A0A0B4J275 112 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 GOLGA8QA0A0J9YX86 632 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 GOLGA8OA6NCC3 632 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 GOLGA8NF8WBI6 632 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 SNX3O60493 162 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 PRAMEF2O60811 474 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 NEURL1O76050 574 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 CBX7O95931 251 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 FAM107AO95990 144 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 G6PDP11413 515 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 PRPS2P11908 318 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 MPIP34949 423 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 CYB561P49447 251 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 HLCSP50747 726 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 NCBP2P52298 156 aaKnown RBP eCLIP15.33■□□□□ 0.04
CXCL1-201ENST00000395761 EBPQ15125 230 aaKnown RBP15.33■□□□□ 0.04
CXCL1-201ENST00000395761 SLC9B1Q4ZJI4 515 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 C6orf163Q5TEZ5 329 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 CISD2Q8N5K1 135 aaKnown RBP15.33■□□□□ 0.04
CXCL1-201ENST00000395761 TMEM156Q8N614 296 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 MDS2Q8NDY4 140 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 OR7G1Q8NGA0 311 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 OR7A2PQ8NGA2 310 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 CEP70Q8NHQ1 597 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 PPCDCQ96CD2 204 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 RASL10BQ96S79 203 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 ELAC2Q9BQ52 826 aaKnown RBP15.33■□□□□ 0.04
CXCL1-201ENST00000395761 WWTR1Q9GZV5 400 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 GLIPR2Q9H4G4 154 aa15.33■□□□□ 0.04
CXCL1-201ENST00000395761 TRIM45Q9H8W5 580 aaPredicted RBP15.33■□□□□ 0.04
CXCL1-201ENST00000395761 SH3BP4Q9P0V3 963 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms