RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 LMNAP02545 664 aaKnown RBP10.72□□□□□ -0.69
RTN1-203ENST00000395090 SCG5P05408 212 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 HSD17B1P14061 328 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 IL1RNP18510 177 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 ME2P23368 584 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 BUD31P41223 144 aaPredicted RBP10.72□□□□□ -0.69
RTN1-203ENST00000395090 ALDH9A1P49189 494 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 SLC7A2P52569 658 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 EEFSECP57772 596 aaKnown RBP10.72□□□□□ -0.69
RTN1-203ENST00000395090 SKP1P63208 163 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 HBA1P69905 142 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 PLIN5Q00G26 463 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 TNFRSF17Q02223 184 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 EGR3Q06889 387 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 TRA2AQ13595 282 aaKnown RBP eCLIP10.72□□□□□ -0.69
RTN1-203ENST00000395090 RABL3Q5HYI8 236 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 NET1Q7Z628 596 aaPredicted RBP10.72□□□□□ -0.69
RTN1-203ENST00000395090 OR9A4Q8NGU2 314 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 OR1L3Q8NH93 324 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 N4BP2L2Q92802 583 aaPredicted RBP10.72□□□□□ -0.69
RTN1-203ENST00000395090 ATOH1Q92858 354 aaPredicted RBP10.72□□□□□ -0.69
RTN1-203ENST00000395090 GBP5Q96PP8 586 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 TRIM4Q9C037 500 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 DENND2DQ9H6A0 471 aaPredicted RBP10.72□□□□□ -0.69
RTN1-203ENST00000395090 PARD6AQ9NPB6 346 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 SLAMF7Q9NQ25 335 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 TAS2R9Q9NYW1 312 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 FTSJ1Q9UET6 329 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 UTS2RQ9UKP6 389 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 POMPQ9Y244 141 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 AP3M1Q9Y2T2 418 aa10.72□□□□□ -0.69
RTN1-203ENST00000395090 CUL9Q8IWT3 2517 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 SCN3AQ9NY46 2000 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 MYO1GB0I1T2 1018 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 TMEM150CB9EJG8 249 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 H0YHG0 523 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 H0YIG0 161 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 SGK494L7N484 410 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 CHST10O43529 356 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 PDE5AO76074 875 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 SORBS2O94875 1100 aaKnown RBP10.71□□□□□ -0.69
RTN1-203ENST00000395090 SPTBP11277 2137 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 CPN2P22792 545 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 TLX1P31314 330 aaPredicted RBP10.71□□□□□ -0.69
RTN1-203ENST00000395090 ECI1P42126 302 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 ITGA1P56199 1179 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 SUMO1P63165 101 aaKnown RBP10.71□□□□□ -0.69
RTN1-203ENST00000395090 ACY1Q03154 408 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 MAP4K2Q12851 820 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 ILKQ13418 452 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 TRIM25Q14258 630 aaKnown RBP10.71□□□□□ -0.69
RTN1-203ENST00000395090 ZNF621Q6ZSS3 439 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 MED25Q71SY5 747 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 NAXDQ8IW45 347 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 CA13Q8N1Q1 262 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 OR5T3Q8NGG3 340 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 WDR60Q8WVS4 1066 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 OR5P2Q8WZ92 322 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 MVB12AQ96EY5 273 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 ZNF681Q96N22 645 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 EDEM2Q9BV94 578 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 KAT8Q9H7Z6 458 aaKnown RBP10.71□□□□□ -0.69
RTN1-203ENST00000395090 C5AR2Q9P296 337 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 PSME2Q9UL46 239 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 PCDHGB4Q9UN71 923 aa10.71□□□□□ -0.69
RTN1-203ENST00000395090 NUP214P35658 2090 aaPredicted RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 A0A0A6YYC8 382 aaPredicted RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 GLOD5A6NK44 160 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 I3L1I5 382 aaPredicted RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 ACOT8O14734 319 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 ZNF749O43361 778 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 MGRN1O60291 552 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 FOXD2O60548 495 aaPredicted RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 PRKRAO75569 313 aaKnown RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 CPSF4O95639 269 aaKnown RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 C6orf47O95873 294 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 NR2F6P10588 404 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 GPX2P18283 190 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 EFNA1P20827 205 aaPredicted RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 ENDOUP21128 410 aaKnown RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 ACTR3P61158 418 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 MS4A2Q01362 244 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 TRAP1Q12931 704 aaKnown RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 IKZF1Q13422 519 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 GTDC1Q4AE62 458 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 PTRH1Q86Y79 214 aaKnown RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 RNF148Q8N7C7 305 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 TTC29Q8NA56 475 aaPredicted RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 TANKQ92844 425 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 EXOSC8Q96B26 276 aaKnown RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 CNRIP1Q96F85 164 aaPredicted RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 ZBED6CLQ96FA7 236 aaPredicted RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 ZNF583Q96ND8 569 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 AMDHD1Q96NU7 426 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 CPPED1Q9BRF8 314 aaPredicted RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 IKZF5Q9H5V7 419 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 RPF2Q9H7B2 306 aaKnown RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 CUTCQ9NTM9 273 aa10.7□□□□□ -0.7
RTN1-203ENST00000395090 SIDT1Q9NXL6 827 aaKnown RBP10.7□□□□□ -0.7
RTN1-203ENST00000395090 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms