RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FAM47E-STBD1D6RA91 191 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 FAM227AF5H4B4 570 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 IL1AP01583 271 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 CYP17A1P05093 508 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 SLC35G6P0C7Q6 338 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 CPN2P22792 545 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ATP12AP54707 1039 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ARPC4P59998 168 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 TAP2Q03519 686 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 LGALS3BPQ08380 585 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNF385BQ569K4 471 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 FAM20CQ8IXL6 584 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 PSD4Q8NDX1 1056 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ATP6V1C2Q8NEY4 427 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.07□□□□□ -0.643e-14■□□□□ 11.2
UBE2D3-209ENST00000394804 SLC38A5Q8WUX1 472 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 IFT27Q9BW83 186 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 MMP28Q9H239 520 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 PELI2Q9HAT8 420 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 DIABLOQ9NR28 239 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 NOTOA8MTQ0 251 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 INMT-MINDY4F8WBC2 141 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 DPM1O60762 260 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ETHE1O95571 254 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 AGR2O95994 175 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ACRP10323 421 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 RPL4P36578 427 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 RAB8AP61006 207 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNHIT3Q15649 155 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 TOR1AIP1Q5JTV8 583 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 PRSS36Q5K4E3 855 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 FAM71E1Q6IPT2 247 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 Q6ZNB5 142 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 PARS2Q7L3T8 475 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 CELF5Q8N6W0 485 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNF655Q8N720 491 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 SLC37A3Q8NCC5 494 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ARMC5Q96C12 935 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 SECISBP2Q96T21 854 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 CDCA4Q9BXL8 241 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 TMEM121BQ9BXQ6 578 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 DPEP2Q9H4A9 486 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 CXorf36Q9H7Y0 433 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 TRIM36Q9NQ86 728 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 SLC35C2Q9NQQ7 365 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNF226Q9NYT6 803 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 PCDHGB2Q9Y5G2 931 aa11.07□□□□□ -0.64
UBE2D3-209ENST00000394804 PRODHO43272 600 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 NOS1APO75052 506 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 VNN2O95498 520 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 FHP07954 510 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 HPGDP15428 266 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 FAM129CQ86XR2 697 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNF740Q8NDX6 193 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 OR4C6Q8NH72 309 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ALG14Q96F25 216 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 RNF121Q9H920 327 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 NUFIP1Q9UHK0 495 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 GPR52Q9Y2T5 361 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 HSPB11Q9Y547 144 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 COLEC10Q9Y6Z7 277 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 HMX3A6NHT5 357 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 M0R082 166 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 PLD2O14939 933 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 HCN1O60741 890 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 COQ9O75208 318 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 OR5F1O95221 314 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 CTSAP10619 480 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 GNG2P59768 71 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ELAVL3Q14576 367 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ERN2Q76MJ5 926 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ADGRD2Q7Z7M1 963 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 LAX1Q8IWV1 398 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 TMEM145Q8NBT3 493 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 FAM98AQ8NCA5 519 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 LCN9Q8WX39 176 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 IRF2BPLQ9H1B7 796 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 NKIRAS2Q9NYR9 191 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 NPAP1Q9NZP6 1156 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 A0A1B0GW55 424 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 SLC5A10A0PJK1 596 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNF670-ZNF695F2Z2N8 137 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 DUX4L2P0CJ85 424 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 DUX4L3P0CJ86 424 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 DUX4L4P0CJ87 422 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 DUX4L5P0CJ88 424 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 DUX4L6P0CJ89 424 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 DUX4L7P0CJ90 424 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 NPPBP16860 134 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 ERP29P30040 261 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 GIPRP48546 466 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 TAS2R38P59533 333 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 HENMT1Q5T8I9 393 aaKnown RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 MFSD4BQ5TF39 518 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 SLX4IPQ5VYV7 408 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 PODNL1Q6PEZ8 512 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 GDPD3Q7L5L3 318 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 SHFQ7M4L6 423 aa11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 GRASPQ7Z6J2 395 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-209ENST00000394804 OR51G2Q8NGK0 314 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms