RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 LBPP18428 481 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 CD6P30203 668 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 TAP2Q03519 686 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 CD47Q08722 323 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 RPA4Q13156 261 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 GRK1Q15835 563 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 KIF19Q2TAC6 998 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 ADNP2Q6IQ32 1131 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 LAYNQ6UX15 382 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 HACD2Q6Y1H2 254 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 BMP8AQ7Z5Y6 402 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 GALNT10Q86SR1 603 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 FUNDC1Q8IVP5 155 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 LRRC56Q8IYG6 542 aaPredicted RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 ABCA7Q8IZY2 2146 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 SYNPOQ8N3V7 929 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 C9orf62Q8N4C0 152 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 TMEM145Q8NBT3 493 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 SCARF2Q96GP6 870 aaPredicted RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 GPR137Q96N19 417 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 TRPS1Q9UHF7 1281 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 ZNF490Q9ULM2 529 aaPredicted RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 SPATA2Q9UM82 520 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 U3KQV3 271 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 PRR19A6NJB7 356 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 CLDN24A6NM45 220 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 GPR89AB7ZAQ6 455 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 MANBAO00462 879 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 DSCR3O14972 297 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 GPIP06744 558 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 GPR89BP0CG08 455 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 GPX3P22352 226 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 AK4P27144 223 aaPredicted RBP17.98■□□□□ 0.47
CCDC50-202ENST00000392456 MAP2K4P45985 399 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 TBPL1P62380 186 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 ZNF91Q05481 1191 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 RFTN2Q52LD8 501 aaPredicted RBP17.98■□□□□ 0.47
CCDC50-202ENST00000392456 C10orf62Q5T681 223 aaPredicted RBP17.98■□□□□ 0.47
CCDC50-202ENST00000392456 NEIL2Q969S2 332 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 REPS1Q96D71 796 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 SLC25A23Q9BV35 468 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 ZCCHC4Q9H5U6 513 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 UCK1Q9HA47 277 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 ZBTB20Q9HC78 741 aaPredicted RBP17.98■□□□□ 0.47
CCDC50-202ENST00000392456 GLS2Q9UI32 602 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 WDR87Q6ZQQ6 2873 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 STK25O00506 426 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 TSC22D2O75157 780 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 ULK1O75385 1050 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 PDYNP01213 254 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 NPPBP16860 134 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 TGFBR2P37173 567 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 LRRC32Q14392 662 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 CLLU1Q5K131 121 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 CCDC190Q86UF4 302 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 OR13H1Q8NG92 308 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 RACGAP1Q9H0H5 632 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 TBC1D17Q9HA65 648 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 PEX16Q9Y5Y5 336 aa17.98■□□□□ 0.47
CCDC50-202ENST00000392456 KHNYNO15037 678 aaKnown RBP17.97■□□□□ 0.47
CCDC50-202ENST00000392456 LDLRP01130 860 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 FABP1P07148 127 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 CHMP24386 653 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 PSMB9P28065 219 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 CCT3P49368 545 aaKnown RBP17.97■□□□□ 0.47
CCDC50-202ENST00000392456 ALDH3A2P51648 485 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 ARSFP54793 590 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 DOC2AQ14183 400 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 NFATC4Q14934 902 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 TTC23Q5W5X9 447 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 Q6ZSR6 202 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 RGL4Q8IZJ4 473 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 SLC22A18ASQ8N1D0 253 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 L3MBTL4Q8NA19 623 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 OR5K2Q8NHB8 316 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 MNTQ99583 582 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 ERVK13-1Q9NX77 482 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 MRPS17Q9Y2R5 130 aaKnown RBP17.97■□□□□ 0.47
CCDC50-202ENST00000392456 CACNA1IQ9P0X4 2223 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 DCNP07585 359 aaKnown RBP17.97■□□□□ 0.47
CCDC50-202ENST00000392456 SLC35G4P0C7Q5 338 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 MYL9P24844 172 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 NUBP1P53384 320 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 DGCR6Q14129 220 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 TAB1Q15750 504 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 XKR6Q5GH73 641 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 SPANXN2Q5MJ10 180 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 OTUD3Q5T2D3 398 aaPredicted RBP17.97■□□□□ 0.47
CCDC50-202ENST00000392456 ARMC4Q5T2S8 1044 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 AMER2Q8N7J2 671 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 DENND6BQ8NEG7 585 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 USP7Q93009 1102 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 C12orf66Q96MD2 445 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 PELOQ9BRX2 385 aaKnown RBP17.97■□□□□ 0.47
CCDC50-202ENST00000392456 TIMM29Q9BSF4 260 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 MENTQ9BUN1 341 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 ESRP2Q9H6T0 727 aaKnown RBP17.97■□□□□ 0.47
CCDC50-202ENST00000392456 IMP3Q9NV31 184 aaKnown RBP17.97■□□□□ 0.47
CCDC50-202ENST00000392456 LIPT1Q9Y234 373 aa17.97■□□□□ 0.47
CCDC50-202ENST00000392456 GPR45Q9Y5Y3 372 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms