RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 RBM39Q14498 530 aaKnown RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 SF3B4Q15427 424 aaKnown RBP eCLIP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 MRPL23Q16540 153 aaKnown RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 SYPL1Q16563 259 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 ZNF74Q16587 644 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 HKDC1Q2TB90 917 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 AMZ1Q400G9 498 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 FSCBQ5H9T9 825 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 ELFN2Q5R3F8 820 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 PRAMEF5Q5TYX0 476 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 PRAMEF6Q5VXH4 476 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 SLC22A10Q63ZE4 541 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 WSCD1Q658N2 575 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 CORO6Q6QEF8 472 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 DEGS2Q6QHC5 323 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 BLOC1S2Q6QNY1 142 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 PARM1Q6UWI2 310 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 DHRS11Q6UWP2 260 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 MON1BQ7L1V2 547 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 PIWIL4Q7Z3Z4 852 aaKnown RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 ITIH5Q86UX2 942 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 RNF130Q86XS8 419 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 EID3Q8N140 333 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 CLEC4FQ8N1N0 589 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 PARP8Q8N3A8 854 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 GTPBP8Q8N3Z3 284 aaPredicted RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 ALLCQ8N6M5 410 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 LINC00469Q8N7U9 141 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 OR2L3Q8NG85 312 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 OR4K14Q8NGD5 310 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 OR1L4Q8NGR5 311 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 TMEM163Q8TC26 289 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 SUN5Q8TC36 379 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 SLC35F5Q8WV83 523 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 DNAJA4Q8WW22 397 aaPredicted RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 ISG20Q96AZ6 181 aaKnown RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 EFHD2Q96C19 240 aaPredicted RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 LRRC39Q96DD0 335 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 BPIFA2Q96DR5 249 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 MTERF3Q96E29 417 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 WBP1Q96G27 269 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 ZNF333Q96JL9 665 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 SGK494Q96LW2 274 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 VSTM2LQ96N03 204 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 RPRD1AQ96P16 312 aaPredicted RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 PANX2Q96RD6 677 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 KXD1Q9BQD3 176 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 TTYH2Q9BSA4 534 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 NDUFAF3Q9BU61 184 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 TRAF4Q9BUZ4 470 aaPredicted RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 BBS2Q9BXC9 721 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 ANKRD60Q9BZ19 345 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 PRRG4Q9BZD6 226 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 DCLK3Q9C098 648 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 SLC26A1Q9H2B4 701 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 XKR8Q9H6D3 395 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 HAUS4Q9H6D7 363 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 DHX33Q9H6R0 707 aaKnown RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 GAREM1Q9H706 876 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 NEK6Q9HC98 313 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 MRPL47Q9HD33 250 aaKnown RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 GKN1Q9NS71 199 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 ZFP57Q9NU63 452 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 SPHK1Q9NYA1 384 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 POMT2Q9UKY4 750 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 VANGL2Q9ULK5 521 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 TBC1D24Q9ULP9 559 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 KCNS2Q9ULS6 477 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 GSTK1Q9Y2Q3 226 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 CSDC2Q9Y534 153 aaKnown RBP1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 RIPK3Q9Y572 518 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 PCDHAC2Q9Y5I4 1007 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 SMCHD1A6NHR9 2005 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 UNC13AQ9UPW8 1703 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 NEDD4P46934 1319 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 MAP3K19Q56UN5 1328 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 UMODL1Q5DID0 1318 aa1.91□□□□□ -2.1
SNORA40.19-201ENST00000390846 ZCWPW2A0A1B0GU75 182 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 A0A1B0GVL5 298 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 A0A1W2PPE3 182 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 PRSS37A4D1T9 235 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 OR6C74A6NCV1 312 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 ACOD1A6NK06 481 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 LRRC30A6NM36 301 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 BTN3A3O00478 584 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 ARPC2O15144 300 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 POLR3GO15318 223 aaPredicted RBP1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 TIMM8AO60220 97 aaPredicted RBP1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 WDR1O75083 606 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 CDH16O75309 829 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 NDUFS6O75380 124 aaKnown RBP1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 KHDRBS3O75525 346 aaKnown RBP1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 STAMBPO95630 424 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 TGM6O95932 706 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 LGI1O95970 557 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 CGAP01215 116 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 OPN1LWP04000 364 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 CRYGBP07316 175 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 IVLP07476 585 aa1.9□□□□□ -2.11
SNORA40.19-201ENST00000390846 RALBP11234 206 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms