RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 C7orf26Q96N11 449 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 GAL3ST4Q96RP7 486 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 WWTR1Q9GZV5 400 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 OR10A5Q9H207 317 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 ANKRD10Q9NXR5 420 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 LRFN1Q9P244 771 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 PCDHGA10Q9Y5H3 936 aa13.95□□□□□ -0.18
IGHV3-53-201ENST00000390627 TMEM200CA6NKL6 621 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 MYO1GB0I1T2 1018 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 WWP2O00308 870 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 PDPK1O15530 556 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 BCAS2O75934 225 aaPredicted RBP13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 OR2J2O76002 312 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 CLPSP04118 112 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 CD46P15529 392 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 LBPP18428 481 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 NCBP2P52298 156 aaKnown RBP eCLIP13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 PDE7AQ13946 482 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 INAQ16352 499 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 ZNF628Q5EBL2 1059 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 CROCCQ5TZA2 2017 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 HLA-DQA1Q5Y7H0 255 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 RPUSD3Q6P087 351 aaKnown RBP13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 FAM111BQ6SJ93 734 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 WDR75Q8IWA0 830 aaKnown RBP13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 ZNF615Q8N8J6 731 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 MDS2Q8NDY4 140 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 OR9A2Q8NGT5 310 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 ZFP28Q8NHY6 868 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 SLC22A8Q8TCC7 542 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 ASB15Q8WXK1 588 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 TMEM125Q96AQ2 219 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 C5orf34Q96MH7 638 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 RASL10BQ96S79 203 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 TRIM45Q9H8W5 580 aaPredicted RBP13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 LIN28AQ9H9Z2 209 aaKnown RBP13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 MED4Q9NPJ6 270 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 SH3BP4Q9P0V3 963 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 PRODH2Q9UF12 536 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 BCAP29Q9UHQ4 241 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 ZNF639Q9UID6 485 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 MAPRE3Q9UPY8 281 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 PCDHGB6Q9Y5F9 930 aa13.94□□□□□ -0.18
IGHV3-53-201ENST00000390627 C2orf92A0A1B0GVN3 265 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 A8MVJ9 347 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 SDHDO14521 159 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 SCAMP2O15127 329 aaKnown RBP13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 G6PDP11413 515 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 PCSK2P16519 638 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 PRPS1L1P21108 318 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 S1PR1P21453 382 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 PTGER1P34995 402 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 MRPS35P82673 323 aaKnown RBP13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 TLE1Q04724 770 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 MGAT2Q10469 447 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 PTGR1Q14914 329 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 PIGGQ5H8A4 983 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 ZNF766Q5HY98 468 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 OGFOD2Q6N063 350 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 ANKRD26P1Q6NSI1 321 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 OPN5Q6U736 354 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 C16orf47Q6ZP98 133 aaPredicted RBP13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 CYP4Z2PQ8N1L4 340 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 SLC15A4Q8N697 577 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 ARFGAP2Q8N6H7 521 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 NATD1Q8N6N6 113 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 TMEM178AQ8NBL3 297 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 CPT1CQ8TCG5 803 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 CKAP2Q8WWK9 683 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 TP53INP1Q96A56 240 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 ZBED6CLQ96FA7 236 aaPredicted RBP13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 MAGEB18Q96M61 343 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 AMDHD1Q96NU7 426 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 SIGLEC12Q96PQ1 595 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 PRPF18Q99633 342 aaKnown RBP13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 ATAD3AQ9NVI7 634 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 HPF1Q9NWY4 346 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 ATP6V1HQ9UI12 483 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 ERVK-11Q9UQG0 969 aa13.93□□□□□ -0.18
IGHV3-53-201ENST00000390627 PLOD3O60568 738 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 COQ9O75208 318 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 SLC25A12O75746 678 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 NEURL1O76050 574 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 CBX7O95931 251 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 IFI6P09912 130 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 SOX3P41225 446 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 ST13P50502 369 aaKnown RBP13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 MLLT10P55197 1068 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 C21orf58P58505 322 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 EXOSC7Q15024 291 aaKnown RBP13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 INPP5JQ15735 1006 aaPredicted RBP13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 PRSS53Q2L4Q9 553 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 TRMT12Q53H54 448 aaKnown RBP13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 ZNF385BQ569K4 471 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 ZNF468Q5VIY5 522 aaPredicted RBP13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 SPINK14Q6IE38 97 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 SLC25A25Q6KCM7 469 aa13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 LARP4Q71RC2 724 aaKnown RBP eCLIP13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 DND1Q8IYX4 353 aaKnown RBP13.92□□□□□ -0.18
IGHV3-53-201ENST00000390627 TAGAPQ8N103 731 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms