RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TCP10L2B9ZVM9 353 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 H3BMH7 237 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 H3BRN7 92 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 J3QR06 171 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SGK1O00141 431 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SIGLEC5O15389 551 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SEPT4O43236 478 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC7A4O43246 635 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 TNFSF14O43557 240 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SYNGR2O43760 224 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 HS6ST1O60243 411 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 USO1O60763 962 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ZBED4O75132 1171 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SS18L1O75177 396 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 KCNK5O95279 499 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC2A10O95528 541 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 CDS2O95674 445 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 IL33O95760 270 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 BAG3O95817 575 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 CCNE2O96020 404 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 OXTP01178 125 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ASGR1P07306 291 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 H2AFZP0C0S5 128 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 C1GALT1C1LP0DN25 315 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 MYBL2P10244 700 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 MYCLP1P12525 358 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ETS2P15036 469 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 GZMHP20718 246 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 VAMP1P23763 118 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 CPT2P23786 658 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ACP1P24666 158 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 KLRK1P26718 216 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 DPP4P27487 766 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 GABRB3P28472 473 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PTPN4P29074 926 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 IL12BP29460 328 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PPP2R1AP30153 589 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PRKCIP41743 596 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RECQLP46063 649 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 NMUP48645 174 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 CX3CR1P49238 355 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 STARP49675 285 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 STK19P49842 368 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ARHGDIBP52566 201 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 EFNB2P52799 333 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 MFAP2P55001 183 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 NAP1L1P55209 391 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 CCL23P55773 120 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 UCP2P55851 309 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 OR1D5P58170 312 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PTENP60484 403 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RPL8P62917 257 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RPS27AP62979 156 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RBM3P98179 157 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 HOXC5Q00444 222 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RUNX1Q01196 453 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 TSPY1Q01534 308 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 OTUD4Q01804 1114 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 KLC1Q07866 573 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RBL2Q08999 1139 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 AP1B1Q10567 949 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 FUT5Q11128 374 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PNRC1Q12796 327 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RAB40BQ12829 278 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 BIKQ13323 160 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 DCTN2Q13561 401 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 GPR50Q13585 617 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ARFRP1Q13795 201 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 EIF4A2Q14240 407 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 GRB14Q14449 540 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 GRB7Q14451 532 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 KRT32Q14532 448 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 CST6Q15828 149 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF141Q15928 474 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PKN2Q16513 984 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 UGCGQ16739 394 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PHKG1Q16816 387 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 C21orf62-AS1Q17RA5 79 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC5A12Q1EHB4 618 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ABCB5Q2M3G0 1257 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 BTBD16Q32M84 506 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 TRIM60Q495X7 471 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 GPR33Q49SQ1 333 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RFTN2Q52LD8 501 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PHLDA2Q53GA4 152 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ODF2Q5BJF6 829 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 CMPK2Q5EBM0 449 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SPANXN4Q5MJ08 99 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 SH2D4BQ5SQS7 431 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RNF219Q5W0B1 726 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 WDR25Q64LD2 544 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ARL6IP4Q66PJ3 421 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 KCTD16Q68DU8 428 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 STUMQ69YW2 141 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF660Q6AZW8 331 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 AMMECR1LQ6DCA0 310 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF470Q6ECI4 717 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ITPRIPL1Q6GPH6 555 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 DGAT2L7PQ6IED9 249 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 FRMPD2BQ6IN97 320 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms