RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 BMP2KLQ5H9B9 411 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 ARMC4Q5T2S8 1044 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 DCAF12Q5T6F0 453 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 SEL1L2Q5TEA6 688 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 TAF3Q5VWG9 929 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 OR52W1Q6IF63 320 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 SULT1C3Q6IMI6 304 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 KLHL10Q6JEL2 608 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 DCLRE1AQ6PJP8 1040 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 BTNL8Q6UX41 500 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 SLFN11Q7Z7L1 901 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 HMGN2P46Q86SG4 172 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 ERICH1Q86X53 443 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 ZNF100Q8IYN0 542 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 TDHQ8IZJ6 230 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 MCOLN2Q8IZK6 566 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 ARRDC1Q8N5I2 433 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 TMEM99Q8N816 258 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 CCDC71LQ8N9Z2 235 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 C20orf203Q8NBC4 194 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 CCDC197Q8NCU1 140 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 OR2L8Q8NGY9 312 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 NCOA7Q8NI08 942 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 RFESDQ8TAC1 157 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 FBXO25Q8TCJ0 367 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 BLOC1S5Q8TDH9 187 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 EXT2Q93063 718 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 PNPLA2Q96AD5 504 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 PCED1BQ96HM7 432 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 TMEM101Q96IK0 257 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 SLC35E1Q96K37 410 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 LINC00477Q96M19 166 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 C9orf85Q96MD7 179 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 ZNF641Q96N77 438 aaPredicted RBP0.2□□□□□ -2.38
SNORD28-201ENST00000384706 GUCD1Q96NT3 240 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 LRRC3BQ96PB8 259 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 IL4I1Q96RQ9 567 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 RAB40CQ96S21 281 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 PRMT1Q99873 361 aaKnown RBP0.2□□□□□ -2.38
SNORD28-201ENST00000384706 CITED2Q99967 270 aaPredicted RBP0.2□□□□□ -2.38
SNORD28-201ENST00000384706 C17orf62Q9BQA9 187 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 SDF4Q9BRK5 362 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 POLR3GLQ9BT43 218 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 ST6GALNAC5Q9BVH7 336 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 TRIM9Q9C026 710 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 GHITMQ9H3K2 345 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 Q9HAA7 133 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 MARCOQ9UEW3 520 aaPredicted RBP0.2□□□□□ -2.38
SNORD28-201ENST00000384706 SLC2A6Q9UGQ3 507 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 PGAP2Q9UHJ9 254 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 ANAPC2Q9UJX6 822 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 TBX21Q9UL17 535 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 PRPF19Q9UMS4 504 aaKnown RBP0.2□□□□□ -2.38
SNORD28-201ENST00000384706 PCDHGB4Q9UN71 923 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 ERVW-1Q9UQF0 538 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 SCML2Q9UQR0 700 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 TMEM5Q9Y2B1 443 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 RNF115Q9Y4L5 304 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 OR1A2Q9Y585 309 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 TRPV2Q9Y5S1 764 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 WIF1Q9Y5W5 379 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 AHNAKQ09666 5890 aaKnown RBP0.2□□□□□ -2.38
SNORD28-201ENST00000384706 BRWD3Q6RI45 1802 aa0.2□□□□□ -2.38
SNORD28-201ENST00000384706 SORL1Q92673 2214 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 PLEKHG1Q9ULL1 1385 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 SDK2Q58EX2 2172 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 A0A096LNJ9 63 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 A0A0J9YXY3 114 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 TRBC2A0A5B9 178 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 ANKDD1BA6NHY2 528 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 COLCA2A8K830 154 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 TMEM110-MUSTN1A8MSY1 372 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 M0R296 226 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 CCSO14618 274 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 FLRT2O43155 660 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 PPIP5K2O43314 1243 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 RIPK2O43353 540 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 EPB41L2O43491 1005 aaKnown RBP0.19□□□□□ -2.38
SNORD28-201ENST00000384706 TYROBPO43914 113 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 PLOD3O60568 738 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 TBL1XO60907 577 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 SPAG7O75391 227 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 CLN5O75503 358 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 SLU7O95391 586 aaKnown RBP0.19□□□□□ -2.38
SNORD28-201ENST00000384706 TGDSO95455 350 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 SLC25A27O95847 323 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 OAS1P00973 400 aaKnown RBP0.19□□□□□ -2.38
SNORD28-201ENST00000384706 WNT2P09544 360 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 NUDT17P0C025 328 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 KRT3P12035 628 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 PORP16435 677 aaPredicted RBP0.19□□□□□ -2.38
SNORD28-201ENST00000384706 IGFBP3P17936 291 aaPredicted RBP0.19□□□□□ -2.38
SNORD28-201ENST00000384706 LBPP18428 481 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 RCC1P18754 421 aaPredicted RBP0.19□□□□□ -2.38
SNORD28-201ENST00000384706 CELP19835 753 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 PSMA3P25788 255 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 UCP1P25874 307 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 PSMB4P28070 264 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 HOXD10P28358 340 aa0.19□□□□□ -2.38
SNORD28-201ENST00000384706 HTR1EP28566 365 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms