RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ZNF576Q9H609 170 aa14.03□□□□□ -0.16
PRNP-201ENST00000379440 EHD3Q9NZN3 535 aa14.03□□□□□ -0.16
PRNP-201ENST00000379440 WARS2Q9UGM6 360 aaKnown RBP14.03□□□□□ -0.16
PRNP-201ENST00000379440 NINQ8N4C6 2090 aa14.03□□□□□ -0.16
PRNP-201ENST00000379440 AQP9O43315 295 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 SEMA7AO75326 666 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 GUCY1B2O75343 617 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 APBB3O95704 486 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 KRT20P35900 424 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 LIMS1P48059 325 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 GP2P55259 537 aaKnown RBP14.02□□□□□ -0.16
PRNP-201ENST00000379440 SRP54P61011 504 aaKnown RBP14.02□□□□□ -0.16
PRNP-201ENST00000379440 PRRT3Q5FWE3 981 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 USP43Q70EL4 1123 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 VN1R4Q7Z5H5 301 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 PAQR7Q86WK9 346 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 SFTPA2Q8IWL1 248 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 SLC38A6Q8IZM9 456 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 TBC1D19Q8N5T2 526 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 SUN3Q8TAQ9 357 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 CHPT1Q8WUD6 406 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 PATE1Q8WXA2 126 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 GTPBP3Q969Y2 492 aaKnown RBP14.02□□□□□ -0.16
PRNP-201ENST00000379440 SLC35G5Q96KT7 338 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 KLHL25Q9H0H3 589 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 ANKRA2Q9H9E1 313 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 RNF6Q9Y252 685 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 TPRKBQ9Y3C4 175 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 PCDHGA10Q9Y5H3 936 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 SCN3AQ9NY46 2000 aa14.02□□□□□ -0.16
PRNP-201ENST00000379440 SHISA7A6NL88 538 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 FAM20BO75063 409 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 ZBTB11O95625 1053 aaPredicted RBP14.02□□□□□ -0.17
PRNP-201ENST00000379440 ANXA8P13928 327 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 RHCEP18577 417 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 NTSP30990 170 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 BTN3A2P78410 334 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 Q6ZSR6 202 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 NRROSQ86YC3 692 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 LINC00469Q8N7U9 141 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 OR4D11Q8NGI4 311 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 VANGL1Q8TAA9 524 aaPredicted RBP14.02□□□□□ -0.17
PRNP-201ENST00000379440 PHF10Q8WUB8 498 aaKnown RBP14.02□□□□□ -0.17
PRNP-201ENST00000379440 FAR1Q8WVX9 515 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 NECTIN4Q96NY8 510 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 COL21A1Q96P44 957 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 MAPKAP1Q9BPZ7 522 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 TREX2Q9BQ50 279 aaPredicted RBP14.02□□□□□ -0.17
PRNP-201ENST00000379440 UQCC2Q9BRT2 126 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 SCN3BQ9NY72 215 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 IFT52Q9Y366 437 aa14.02□□□□□ -0.17
PRNP-201ENST00000379440 A6NCN8 305 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 LRRC72A6NJI9 287 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 ZW10O43264 779 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 NME6O75414 186 aaPredicted RBP14.01□□□□□ -0.17
PRNP-201ENST00000379440 ITIH1P19827 911 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 MAGP20916 626 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 HMGA2P52926 109 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 TMBIM6P55061 237 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 CXCR4P61073 352 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 FBXO42Q6P3S6 717 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 OR10G6Q8NH81 332 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 ALPK1Q96QP1 1244 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 FUNDC2Q9BWH2 189 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 C8orf33Q9H7E9 229 aaPredicted RBP14.01□□□□□ -0.17
PRNP-201ENST00000379440 SIAEQ9HAT2 523 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 CES1P1Q9UKY3 287 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 PCOLCE2Q9UKZ9 415 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 COL4A2P08572 1712 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 F3P13726 295 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 ZNF182P17025 639 aaPredicted RBP14.01□□□□□ -0.17
PRNP-201ENST00000379440 NDUFS1P28331 727 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 DGKEP52429 567 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 PROX2Q3B8N5 592 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 ZNF829Q3KNS6 432 aaPredicted RBP14.01□□□□□ -0.17
PRNP-201ENST00000379440 ZNF542PQ5EBM4 170 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 EOGTQ5NDL2 527 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 TMEM107Q6UX40 140 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 COMTD1Q86VU5 262 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 LACC1Q8IV20 430 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 NLGN4XQ8N0W4 816 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 FLVCR1-AS1Q8TAF5 88 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 DNASE1L2Q92874 299 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 FKBP10Q96AY3 582 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 C16orf58Q96GQ5 468 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 TCEAL2Q9H3H9 227 aaPredicted RBP14.01□□□□□ -0.17
PRNP-201ENST00000379440 C6orf106Q9H6K1 298 aaPredicted RBP14.01□□□□□ -0.17
PRNP-201ENST00000379440 C12orf4Q9NQ89 552 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 TRIOO75962 3097 aa14.01□□□□□ -0.17
PRNP-201ENST00000379440 ZNF99A8MXY4 864 aaPredicted RBP14□□□□□ -0.17
PRNP-201ENST00000379440 PROM1O43490 865 aa14□□□□□ -0.17
PRNP-201ENST00000379440 NOL3O60936 208 aaKnown RBP14□□□□□ -0.17
PRNP-201ENST00000379440 CCNB2O95067 398 aa14□□□□□ -0.17
PRNP-201ENST00000379440 GASTP01350 101 aa14□□□□□ -0.17
PRNP-201ENST00000379440 MT-ND2P03891 347 aa14□□□□□ -0.17
PRNP-201ENST00000379440 NR2F1P10589 423 aa14□□□□□ -0.17
PRNP-201ENST00000379440 POLR2CP19387 275 aaPredicted RBP14□□□□□ -0.17
PRNP-201ENST00000379440 GGT2P36268 569 aa14□□□□□ -0.17
PRNP-201ENST00000379440 IDH2P48735 452 aaKnown RBP14□□□□□ -0.17
PRNP-201ENST00000379440 MASP1P48740 699 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms