RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 PHF3Q92576 2039 aaKnown RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 RNGTTO60942 597 aaKnown RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 CRYZL1O95825 349 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 ITGA1P56199 1179 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 RPS14P62263 151 aaKnown RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 LARS2Q15031 903 aaKnown RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 GPAT3Q53EU6 434 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 C10orf62Q5T681 223 aaPredicted RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 NOXRED1Q6NXP6 359 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 MAML2Q8IZL2 1156 aaPredicted RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 C9orf62Q8N4C0 152 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 FATE1Q969F0 183 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 ASPNQ9BXN1 380 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 FOXQ1Q9C009 403 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 K7EQS6 105 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 K7ESM1 405 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 PROS1P07225 676 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 CCNYL3P0C7X3 344 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 IRF1P10914 325 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 IL2P60568 153 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 HYAL4Q2M3T9 481 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 C2orf68Q2NKX9 166 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 PRMT9Q6P2P2 845 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 AFTPHQ6ULP2 937 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 EFL1Q7Z2Z2 1120 aaKnown RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 OR8H2Q8N162 312 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 OR13C5Q8NGS8 318 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 STK35Q8TDR2 534 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 ASB12Q8WXK4 309 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 SORCS1Q8WY21 1168 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 RAB8BQ92930 207 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 SOSTQ9BQB4 213 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 HACD3Q9P035 362 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 NCDNQ9UBB6 729 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 PCDHGB2Q9Y5G2 931 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 OR6C70A6NIJ9 312 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 LOC110117498-PIK3R3F6TDL0 507 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 ZNF883P0CG24 379 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 ZNF30P17039 623 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 TACR2P21452 398 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 ARHGDIBP52566 201 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 BCL2L1Q07817 233 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 FUT5Q11128 374 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 DGUOKQ16854 277 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 CYP2U1Q7Z449 544 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 WDR20Q8TBZ3 569 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 SLC25A28Q96A46 364 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 TOE1Q96GM8 510 aaKnown RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 EGLN3Q9H6Z9 239 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 NCKAP1Q9Y2A7 1128 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 RGS5O15539 181 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 DNAJB6O75190 326 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 TNFRSF21O75509 655 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 RHOQP17081 205 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 MAPK8P45983 427 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 YBEYP58557 167 aaPredicted RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 PRKCDQ05655 676 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 TBCEQ15813 527 aaPredicted RBP6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 SLC6A19Q695T7 634 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 TMEM145Q8NBT3 493 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 SLC7A13Q8TCU3 470 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 KCNJ9Q92806 393 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 MARC2Q969Z3 335 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 CATSPERBQ9H7T0 1116 aa6.94□□□□□ -1.3
GPCPD1-201ENST00000379019 TBC1D3BA6NDS4 549 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 CRCPO75575 148 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 SLC26A3P40879 764 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 CCR5P51681 352 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 CLDN2P57739 230 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 NFATC2Q13469 925 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 PIN1Q13526 163 aaPredicted RBP6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 POU4F3Q15319 338 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 RGNQ15493 299 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 FAAP20Q6NZ36 180 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 ZNF517Q6ZMY9 492 aaPredicted RBP6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 QSOX2Q6ZRP7 698 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 OR5D16Q8NGK9 328 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 ZNRF4Q8WWF5 429 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 ULK4Q96C45 1275 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 DPY30Q9C005 99 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 TPT1P8Q9HAU6 139 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 LHX9Q9NQ69 397 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 TXNL4BQ9NX01 149 aaKnown RBP6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 TOR4AQ9NXH8 423 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 FAM220BPB1ANY3 271 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 RFXANKO14593 260 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 GFRA3O60609 400 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 CLK1P49759 484 aaKnown RBP6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 FXYD6P3P58550 94 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 ZNF177Q13360 481 aaPredicted RBP6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 RNF219Q5W0B1 726 aaPredicted RBP6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 OTPQ5XKR4 325 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 ZNF776Q68DI1 518 aaPredicted RBP6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 RETSATQ6NUM9 610 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 TCTN3Q6NUS6 607 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 NOXA1Q86UR1 476 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 OR56A4Q8NGH8 313 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 GATAD2BQ8WXI9 593 aa6.93□□□□□ -1.3
GPCPD1-201ENST00000379019 LMLNQ96KR4 655 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms