RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NEMP2A6NFY4 417 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 TREHO43280 583 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 PEX10O60683 326 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 PCMT1P22061 227 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 CSF2RBP32927 897 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 CD86P42081 329 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 IL2P60568 153 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 SKP1P63208 163 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 FAM180AQ6UWF9 173 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 QSOX2Q6ZRP7 698 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 SH2D5Q6ZV89 423 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 SZRD1Q7Z422 152 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 OR4F6Q8NGB9 312 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 ISL2Q96A47 359 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 TMEM125Q96AQ2 219 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 RBP7Q96R05 134 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 NTMT1Q9BV86 223 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 TRPM3Q9HCF6 1732 aaPredicted RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 COL1A2P08123 1366 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 RFPL4AA6NLU0 287 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 RFPL4AL1F8VTS6 287 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 IL1AP01583 271 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 GKN3PP0CG01 181 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 DDTP30046 118 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 AVPR1BP47901 424 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF157P51786 506 aaPredicted RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 NRG1Q02297 640 aaPredicted RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 NHLH2Q02577 135 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 COQ5Q5HYK3 327 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 MTSS1LQ765P7 747 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 CYP4Z1Q86W10 505 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 ATCAYQ86WG3 371 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 WFIKKN2Q8TEU8 576 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 CNOT9Q92600 299 aaKnown RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 CD244Q9BZW8 370 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 NXF3Q9H4D5 531 aaKnown RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 ESRP2Q9H6T0 727 aaKnown RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 PNO1Q9NRX1 252 aaKnown RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 RPL36Q9Y3U8 105 aaKnown RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 GON4LQ3T8J9 2241 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 A6NCN8 305 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 G3V2L1 256 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 ADAP00813 363 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 ANXA2P07355 339 aaKnown RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 GLP1RP43220 463 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 SPIBQ01892 262 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 DPY19L1Q2PZI1 675 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 ANKRD39Q53RE8 183 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 TAS1R3Q7RTX0 852 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 MILR1Q7Z6M3 343 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 ADGRG2Q8IZP9 1017 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 STPG2Q8N412 459 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 C1orf52Q8N6N3 182 aaKnown RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 BPIFCQ8NFQ6 507 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 OR1J4Q8NGS1 313 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 FAM110BQ8TC76 370 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 HASPINQ8TF76 798 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 NPRL2Q8WTW4 380 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 SLC25A36Q96CQ1 311 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 PYURFQ96I23 114 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 C12orf42Q96LP6 360 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 MEAF6Q9HAF1 191 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 BTNL2Q9UIR0 455 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 S100A3P33764 101 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 RBM34P42696 430 aaKnown RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 MAGEB1P43366 347 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 UBE2IP63279 158 aaKnown RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF674Q2M3X9 581 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 IL27RAQ6UWB1 636 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 NKAIN4Q8IVV8 208 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 HDDC3Q8N4P3 179 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 TRAM1L1Q8N609 369 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 NAXEQ8NCW5 288 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 SEMA6DQ8NFY4 1073 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 STYXQ8WUJ0 223 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 GCDHQ92947 438 aaPredicted RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 UCN3Q969E3 161 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 THAP7Q9BT49 309 aaPredicted RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 TPT1P8Q9HAU6 139 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 PCDHB8Q9UN66 801 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 SLC27A6Q9Y2P4 619 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 TJP1Q07157 1748 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 ADM5C9JUS6 153 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 AP4M1O00189 453 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 GATBO75879 557 aaKnown RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 SNRNP70P08621 437 aaKnown RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 SPI1P17947 270 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 AKR1C2P52895 323 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 HNRNPKP61978 463 aaKnown RBP eCLIP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 AKR1C1Q04828 323 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 AIMP2Q13155 320 aaKnown RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 SCGB2B2Q4G0G5 96 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 TMEM145Q8NBT3 493 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF248Q8NDW4 579 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 RSC1A1Q92681 617 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 MS4A3Q96HJ5 214 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 TEPSINQ96N21 525 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 KLHL5Q96PQ7 755 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 KCNA7Q96RP8 456 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms