RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 RAB3BP20337 219 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 ZXDBP98169 803 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SNTB2Q13425 540 aaKnown RBP8.35□□□□□ -1.07
PCDH9-202ENST00000377865 LASP1Q14847 261 aaKnown RBP8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SF3B4Q15427 424 aaKnown RBP eCLIP8.35□□□□□ -1.07
PCDH9-202ENST00000377865 C3orf38Q5JPI3 329 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 FRMPD2BQ6IN97 320 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 LRRC28Q86X40 367 aaPredicted RBP8.35□□□□□ -1.07
PCDH9-202ENST00000377865 PNPLA1Q8N8W4 532 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 L3MBTL4Q8NA19 623 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 LCN9Q8WX39 176 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 CACNG6Q9BXT2 260 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 OR51J1Q9H342 316 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 INPP5EQ9NRR6 644 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 EDDM13A0A1B0GTR0 161 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 LRRC72A6NJI9 287 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 CTDSP2O14595 271 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SCN2BO60939 215 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 KCNK5O95279 499 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 AGTR1P30556 359 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 GABRA5P31644 462 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 GKP32189 559 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 CCL23P55773 120 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 VLDLRP98155 873 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SP3Q02447 781 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 GPR68Q15743 365 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 FAM217AQ8IXS0 508 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 OR10H5Q8NGA6 315 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 OR6K6Q8NGW6 343 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 TRMT10AQ8TBZ6 339 aaKnown RBP8.35□□□□□ -1.07
PCDH9-202ENST00000377865 TFGQ92734 400 aaPredicted RBP8.35□□□□□ -1.07
PCDH9-202ENST00000377865 CENPOQ9BU64 300 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 PPA2Q9H2U2 334 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF639Q9UID6 485 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 PCDHGA6Q9Y5G7 932 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 CORINQ9Y5Q5 1042 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 ALG5Q9Y673 324 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 C1orf226A1L170 272 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 H7C2Y5 167 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 HLA-DMAP28067 261 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 KCNC1P48547 511 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SLC35F1Q5T1Q4 408 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 TIGD4Q8IY51 512 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 GHDCQ8N2G8 530 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF676Q8N7Q3 588 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 OR10G6Q8NH81 332 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 PRRC1Q96M27 445 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 HDHD5Q9BXW7 423 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 PITHD1Q9GZP4 211 aaPredicted RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 INSL5Q9Y5Q6 135 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 PRSS21Q9Y6M0 314 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 CA12O43570 354 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 VEGFDO43915 354 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 ARAFP10398 606 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 MAP3K8P41279 467 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 ASAH1Q13510 395 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 CAMK1Q14012 370 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 LRRC32Q14392 662 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 PLK5Q496M5 336 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF805Q5CZA5 627 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 EIF5AL1Q6IS14 154 aaKnown RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SLC25A25Q6KCM7 469 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 ARHGAP11AQ6P4F7 1023 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM151AQ8N4L1 468 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SLC44A3Q8N4M1 653 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 GRHL3Q8TE85 626 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 TBC1D20Q96BZ9 403 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 ADAD1Q96M93 576 aaKnown RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 THAP7Q9BT49 309 aaPredicted RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 BACE2Q9Y5Z0 518 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 FXYD1O00168 92 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SOX30O94993 753 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 CAPNS1P04632 268 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 MMP2P08253 660 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 DDCP20711 480 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 CHMP24386 653 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 POLR2IP36954 125 aaKnown RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 GCGRP47871 477 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SNRPGP62308 76 aaKnown RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 MLLT1Q03111 559 aaPredicted RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 INAVAQ3KP66 663 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 MINDY4Q4G0A6 757 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 PGBD2Q6P3X8 592 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 FAM83HQ6ZRV2 1179 aaPredicted RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SPATC1Q76KD6 591 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 PDZD9Q8IXQ8 264 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 KCTD12Q96CX2 325 aaKnown RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 DIMT1Q9UNQ2 313 aaKnown RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 WDR45Q9Y484 360 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 CYP17A1P05093 508 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 GKN3PP0CG01 181 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 CDKN2CP42773 168 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 MRPS10P82664 201 aaKnown RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 AQP6Q13520 282 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 TIGD3Q6B0B8 471 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SBSNQ6UWP8 590 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 TSPAN33Q86UF1 283 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 C3orf58Q8NDZ4 430 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 RBFOX1Q9NWB1 397 aaKnown RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 KLHL9Q9P2J3 617 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms