RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TECRLQ5HYJ1 363 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 CCNYL2Q5T2Q4 361 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 DGAT2L6Q6ZPD8 337 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 KIF18BQ86Y91 864 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 RELL1Q8IUW5 271 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 PTGR2Q8N8N7 351 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-204ENST00000376643 ZNF441Q8N8Z8 693 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 TMEM41AQ96HV5 264 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 ANGPTL4Q9BY76 406 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 SLC6A15Q9H2J7 730 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 BRF2Q9HAW0 419 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 DNAJB12Q9NXW2 375 aaKnown RBP13.54□□□□□ -0.24
HDAC6-204ENST00000376643 RNF11Q9Y3C5 154 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 DCHS2Q6V1P9 2916 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 CSMD2Q7Z408 3487 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 HCFC1P51610 2035 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 FAM221AA4D161 298 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 SYT5O00445 386 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 ACOX3O15254 700 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 PRKRAO75569 313 aaKnown RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 ALDOAP04075 364 aaKnown RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 HPNP05981 417 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 KLK1P06870 262 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 RHOXF2BP0C7M4 288 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 RFPL3SP0C7P2 107 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 CPMP14384 443 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 UQCRC1P31930 480 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 ADH7P40394 386 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 CDK9P50750 372 aaKnown RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 XKP51811 444 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 NEK2P51955 445 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 SNTA1Q13424 505 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 RCAN2Q14206 197 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 FBXL19-AS1Q494R0 122 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 ACSF3Q4G176 576 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 NHSL2Q5HYW2 709 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 LGSNQ5TDP6 509 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 TMEM81Q6P7N7 255 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 MILR1Q7Z6M3 343 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 SAMD14Q8IZD0 417 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 VWA5B2Q8N398 1253 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 RNF175Q8N4F7 328 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 GOT1L1Q8NHS2 421 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 FAM222BQ8WU58 562 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 RNASE6Q93091 150 aaKnown RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 ISL2Q96A47 359 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 MRRFQ96E11 262 aaKnown RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 PHF21BQ96EK2 531 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 RMND5BQ96G75 393 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 RILPQ96NA2 401 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 FOXC2Q99958 501 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 POLDIP3Q9BY77 421 aaKnown RBP13.53□□□□□ -0.24
HDAC6-204ENST00000376643 METTL7AQ9H8H3 244 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 PRODH2Q9UF12 536 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 C15orf41Q9Y2V0 281 aa13.53□□□□□ -0.24
HDAC6-204ENST00000376643 CTAG2O75638 210 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 BCAS2O75934 225 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 SIX3O95343 332 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 ACTL6AO96019 429 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 ATP1B1P05026 303 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 CSNK2A2P19784 350 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 SSTR4P31391 388 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 DNAJA1P31689 397 aaKnown RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 GMPRP36959 345 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 TRA2BP62995 288 aaKnown RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 EEF1A1P68104 462 aaKnown RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 CRYZQ08257 329 aaKnown RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 TOMM20Q15388 145 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 FLYWCH1Q4VC44 716 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 EEF1A1P5Q5VTE0 462 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 NSUN5P2Q63ZY6 315 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 SLC30A6Q6NXT4 461 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 SYT10Q6XYQ8 523 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 METTL4Q8N3J2 472 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 ZNF615Q8N8J6 731 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 SLC44A1Q8WWI5 657 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 ADIPOR1Q96A54 375 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 ZFP3Q96NJ6 502 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 GPR78Q96P69 363 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 MRPL57Q9BQC6 102 aaKnown RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 FUT8Q9BYC5 575 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 SHCBP1LQ9BZQ2 653 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 PRDM14Q9GZV8 571 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 MRPL46Q9H2W6 279 aaKnown RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 ACBD3Q9H3P7 528 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 PROK2Q9HC23 129 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 TEX10Q9NXF1 929 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-204ENST00000376643 XPR1Q9UBH6 696 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 FETUBQ9UGM5 382 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 PCTPQ9UKL6 214 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 STK38LQ9Y2H1 464 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 ZNF780BQ9Y6R6 833 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 TACC2O95359 2948 aa13.52□□□□□ -0.25
HDAC6-204ENST00000376643 HMX2A2RU54 273 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 CD8B2A6NJW9 211 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 OR7A17O14581 309 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 PGRMC2O15173 223 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 ABCB7O75027 752 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 PPM1BO75688 479 aa13.51□□□□□ -0.25
HDAC6-204ENST00000376643 CLPSP04118 112 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms