RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 VMP1Q96GC9 406 aa16.5■□□□□ 0.23
C6orf48-204ENST00000375639 FBXL20Q96IG2 436 aa16.5■□□□□ 0.23
C6orf48-204ENST00000375639 ING2Q9H160 280 aa16.5■□□□□ 0.23
C6orf48-204ENST00000375639 TMEM45AQ9NWC5 275 aa16.5■□□□□ 0.23
C6orf48-204ENST00000375639 FAM120CQ9NX05 1096 aaKnown RBP16.5■□□□□ 0.23
C6orf48-204ENST00000375639 COPS7AQ9UBW8 275 aa16.5■□□□□ 0.23
C6orf48-204ENST00000375639 PCDHGB4Q9UN71 923 aa16.5■□□□□ 0.23
C6orf48-204ENST00000375639 PRSS51A0A1B0GVH4 220 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 RNASET2O00584 256 aaKnown RBP16.49■□□□□ 0.23
C6orf48-204ENST00000375639 NDUFAB1O14561 156 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 SSTR4P31391 388 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 MC3RP41968 323 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 CDK9P50750 372 aaKnown RBP16.49■□□□□ 0.23
C6orf48-204ENST00000375639 CLCN2P51788 898 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 GPR143P51810 404 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 Q0VFX4 171 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 KLF10Q13118 480 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 MLC1Q15049 377 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 TIGD2Q4W5G0 525 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 BLOC1S3Q6QNY0 202 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 TMEM107Q6UX40 140 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 GK5Q6ZS86 529 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 KBTBD2Q8IY47 623 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 ZNF321PQ8N8H1 164 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 OR1N1Q8NGS0 311 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 ZNF721Q8TF20 911 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 VPS33AQ96AX1 596 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 SPDL1Q96EA4 605 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 THOC3Q96J01 351 aaKnown RBP16.49■□□□□ 0.23
C6orf48-204ENST00000375639 MAGED4Q96JG8 741 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 NUDT9Q9BW91 350 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 ANKRA2Q9H9E1 313 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 MMP25Q9NPA2 562 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 ARMCX1Q9P291 453 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 BCAP29Q9UHQ4 241 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 PPIEQ9UNP9 301 aaKnown RBP16.49■□□□□ 0.23
C6orf48-204ENST00000375639 KCNMB2Q9Y691 235 aa16.49■□□□□ 0.23
C6orf48-204ENST00000375639 TRBV11-1A0A0K0K1C0 115 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 CCDC154A6NI56 674 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 A6NL46 340 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 SCN2BO60939 215 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 SERPINA7P05543 415 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 CD1EP15812 388 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 ITGA3P26006 1051 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 CCL11P51671 97 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 FUT7Q11130 342 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 RCAN2Q14206 197 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 EXOSC7Q15024 291 aaKnown RBP16.48■□□□□ 0.23
C6orf48-204ENST00000375639 VPS26BQ4G0F5 336 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 IRAK1BP1Q5VVH5 260 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 RNF111Q6ZNA4 994 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 KIF2BQ8N4N8 673 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 APCDD1LQ8NCL9 501 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 CCDC197Q8NCU1 140 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 OR7G2Q8NG99 324 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 OR4A15Q8NGL6 344 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 CTHRC1Q96CG8 243 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 ELP4Q96EB1 424 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 CRELD1Q96HD1 420 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 SNX8Q9Y5X2 465 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 CAPN7Q9Y6W3 813 aa16.48■□□□□ 0.23
C6orf48-204ENST00000375639 A8MUI8 341 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 PLOD2O00469 737 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 DNAJB5O75953 348 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 SLITRK5O94991 958 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 IGKV3-11P04433 115 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 SNRPB2P08579 225 aaKnown RBP16.47■□□□□ 0.23
C6orf48-204ENST00000375639 ITGAMP11215 1152 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 CAPN3P20807 821 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 S1PR1P21453 382 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 ADSLP30566 484 aaPredicted RBP16.47■□□□□ 0.23
C6orf48-204ENST00000375639 SOX18P35713 384 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 AP2B1P63010 937 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 HBA1P69905 142 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 MAPKAPK3Q16644 382 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 SPDYE7PQ495Y7 208 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 SZRD1Q7Z422 152 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 GALNT16Q8N428 558 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 SIMC1Q8NDZ2 872 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 OR7G1Q8NGA0 311 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 OR52R1Q8NGF1 315 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 ELP5Q8TE02 316 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 SNRNP27Q8WVK2 155 aaKnown RBP16.47■□□□□ 0.23
C6orf48-204ENST00000375639 APOBEC4Q8WW27 367 aaKnown RBP16.47■□□□□ 0.23
C6orf48-204ENST00000375639 DEFB126Q9BYW3 111 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 SEMA4CQ9C0C4 833 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 OR10A5Q9H207 317 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 RMND5AQ9H871 391 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 DDX18Q9NVP1 670 aaKnown RBP16.47■□□□□ 0.23
C6orf48-204ENST00000375639 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.47■□□□□ 0.232e-22■■■■□ 22.5
C6orf48-204ENST00000375639 TAS2R9Q9NYW1 312 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 PTGFRNQ9P2B2 879 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 ZNF639Q9UID6 485 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 BTNL2Q9UIR0 455 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 ZNF223Q9UK11 482 aaPredicted RBP16.47■□□□□ 0.23
C6orf48-204ENST00000375639 CELSR3Q9NYQ7 3312 aa16.47■□□□□ 0.23
C6orf48-204ENST00000375639 A0A087WV62 115 aa16.46■□□□□ 0.23
C6orf48-204ENST00000375639 PLOD3O60568 738 aa16.46■□□□□ 0.23
C6orf48-204ENST00000375639 BCAS2O75934 225 aaPredicted RBP16.46■□□□□ 0.23
C6orf48-204ENST00000375639 DCTN3O75935 186 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms