RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ARNTL2Q8WYA1 636 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 GATA6Q92908 595 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 LRIG1Q96JA1 1093 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 MGLLQ99685 303 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 TMEM121BQ9BXQ6 578 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF705FA8MVS1 300 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 GRXCR1A8MXD5 290 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 RGS9O75916 674 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 FGF18O76093 207 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF705DP0CH99 300 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF705BP0CI00 300 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 RAB3BP20337 219 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 ACTC1P68032 377 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 ACTA1P68133 377 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 CHRFAM7AQ494W8 412 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 SLC22A10Q63ZE4 541 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 GSG1LQ6UXU4 331 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 NRSN1Q8IZ57 195 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 OR8J1Q8NGP2 316 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 TMEM41AQ96HV5 264 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 OR2S2Q9NQN1 319 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 PCYT1BQ9Y5K3 369 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF840PA6NDX5 716 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 SHMT2P34897 504 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 STK19P49842 368 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 TBC1D25Q3MII6 688 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 RAB41Q5JT25 222 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 HS3ST5Q8IZT8 346 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 AVL9Q8NBF6 648 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 RELTQ969Z4 430 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 PTERQ96BW5 349 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 PAAF1Q9BRP4 392 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 RNF121Q9H920 327 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 TAS2R8Q9NYW2 309 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 BLOC1S5-TXNDC5H3BN57 136 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 EMC8O43402 210 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 ALPPL2P10696 532 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 CDKN1CP49918 316 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 NXPE4Q6UWF7 544 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 GDPD1Q8N9F7 314 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 NUP43Q8NFH3 380 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 SCAMP4Q969E2 229 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 TMEM125Q96AQ2 219 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 TLR9Q9NR96 1032 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 SDR39U1Q9NRG7 319 aaPredicted RBP13.57□□□□□ -0.24
LMX1B-202ENST00000373474 SARDHQ9UL12 918 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 NUP98P52948 1817 aa13.57□□□□□ -0.24
LMX1B-202ENST00000373474 MRPL3P09001 348 aaKnown RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 HLA-EP13747 358 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 SLC6A9P48067 706 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 MANEALQ5VSG8 457 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 SLC9B2Q86UD5 537 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 CCDC116Q8IYX3 515 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 FAM86B1Q8N7N1 296 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 NETO1Q8TDF5 533 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 STK35Q8TDR2 534 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ARL5BQ96KC2 179 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 GPR62Q9BZJ7 368 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 B3GAT2Q9NPZ5 323 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 EMCNQ9ULC0 261 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ASB4Q9Y574 426 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 TGM6O95932 706 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 SNTB2Q13425 540 aaKnown RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF674Q2M3X9 581 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF550Q7Z398 422 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 SLC15A4Q8N697 577 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 OR13J1Q8NGT2 312 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ABCG5Q9H222 651 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 SPHK2Q9NRA0 654 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 TIMM8BQ9Y5J9 83 aaPredicted RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 LDB2O43679 373 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 TSPAN15O95858 294 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 IQCF3P0C7M6 154 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 KCNC1P48547 511 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF616Q08AN1 781 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 PRRT3Q5FWE3 981 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 C22orf42Q6IC83 251 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 GRASPQ7Z6J2 395 aaPredicted RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 GPAT4Q86UL3 456 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 VWA5B2Q8N398 1253 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 TUBG2Q9NRH3 451 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 VILLO15195 856 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 MRPS14O60783 128 aaKnown RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 GP1BBP13224 206 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 HRH2P25021 359 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 HMGCLP35914 325 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ERN2Q76MJ5 926 aaKnown RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 OR5T2Q8NGG2 359 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 PHOSPHO1Q8TCT1 267 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 PNPLA2Q96AD5 504 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF689Q96CS4 500 aaPredicted RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ORAI3Q9BRQ5 295 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ELOVL2Q9NXB9 296 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 MRPS17Q9Y2R5 130 aaKnown RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 C2orf78A6NCI8 922 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 ZNF701M0R085 212 aaPredicted RBP13.56□□□□□ -0.24
LMX1B-202ENST00000373474 VEGFDO43915 354 aa13.56□□□□□ -0.24
LMX1B-202ENST00000373474 PEX14O75381 377 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms