RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ABCG4Q9H172 646 aa12.98□□□□□ -0.33
USP49-201ENST00000373006 SPNS1Q9H2V7 528 aa12.98□□□□□ -0.33
USP49-201ENST00000373006 GPBP1L1Q9HC44 474 aaPredicted RBP12.98□□□□□ -0.33
USP49-201ENST00000373006 SLC30A4O14863 429 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 NME6O75414 186 aaPredicted RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 SERPINI2O75830 405 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 NR2F6P10588 404 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 ETV3P41162 512 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 DGKGP49619 791 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 WNT4P56705 351 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 SNAPC1Q16533 368 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 FAM26DQ5JW98 314 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 MZT2BQ6NZ67 158 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 FBXL6Q8N531 539 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 SLC37A3Q8NCC5 494 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 GALNT11Q8NCW6 608 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 APOBEC4Q8WW27 367 aaKnown RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 ZNF582Q96NG8 517 aaPredicted RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 NLNQ9BYT8 704 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 DIMT1Q9UNQ2 313 aaKnown RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 SCN8AQ9UQD0 1980 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 ARRDC5A6NEK1 342 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 SLCO2B1O94956 709 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 OR12D1P0DN82 309 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 IRS1P35568 1242 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 RRAS2P62070 204 aaPredicted RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 ABATP80404 500 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 MRPL28Q13084 256 aaKnown RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 KCNC3Q14003 757 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 SZRD1Q7Z422 152 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 CHST14Q8NCH0 376 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 C2orf15Q8WU43 125 aaKnown RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 AP3S1Q92572 193 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 OTUB1Q96FW1 271 aaPredicted RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 SENP5Q96HI0 755 aaPredicted RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 SMAD5Q99717 465 aaKnown RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 GPA33Q99795 319 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 HELZP42694 1942 aaKnown RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 A0A1B0GVC2 190 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 A6NIN4 97 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 LEUTXA8MZ59 168 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 M0R3H8 397 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 SNRPD1P62314 119 aaKnown RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 FKBP1BP68106 108 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 TLE2Q04725 743 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 ASB18Q6ZVZ8 466 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 HSD11B1LQ7Z5J1 315 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 NIPAL2Q9H841 368 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 TAAR2Q9P1P5 351 aa12.97□□□□□ -0.33
USP49-201ENST00000373006 SF3B6Q9Y3B4 125 aaKnown RBP12.97□□□□□ -0.33
USP49-201ENST00000373006 UNC80Q8N2C7 3258 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 C2orf92A0A1B0GVN3 265 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 SHISA3A0PJX4 238 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 GREM1O60565 184 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 LALBAP00709 142 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 CATP04040 527 aaKnown RBP12.96□□□□□ -0.33
USP49-201ENST00000373006 GIPRP48546 466 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 ACLYP53396 1101 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 OCLNQ16625 522 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 POM121L1PQ3SYA9 428 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 FAM71E1Q6IPT2 247 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 PODNL1Q6PEZ8 512 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 LIX1LQ8IVB5 337 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 DNAJC5GQ8N7S2 189 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 METTL2AQ96IZ6 378 aaKnown RBP12.96□□□□□ -0.33
USP49-201ENST00000373006 PPIL3Q9H2H8 161 aaKnown RBP12.96□□□□□ -0.33
USP49-201ENST00000373006 MCCC2Q9HCC0 563 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 TESQ9UGI8 421 aaKnown RBP12.96□□□□□ -0.33
USP49-201ENST00000373006 STOML2Q9UJZ1 356 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 GSTK1Q9Y2Q3 226 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 INMT-MINDY4F8WBC2 141 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 RTCAO00442 366 aaKnown RBP12.96□□□□□ -0.33
USP49-201ENST00000373006 EPHX1P07099 455 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 NPPBP16860 134 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 MMP11P24347 488 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 AKR1D1P51857 326 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 TBPL1P62380 186 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 HSPB3Q12988 150 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 MAB21L1Q13394 359 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 BTN1A1Q13410 526 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 TIGD3Q6B0B8 471 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 CREB3L2Q70SY1 520 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 ZER1Q7Z7L7 766 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 TMEM150AQ86TG1 271 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 DDX53Q86TM3 631 aaKnown RBP12.96□□□□□ -0.33
USP49-201ENST00000373006 COMTD1Q86VU5 262 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 DUSP18Q8NEJ0 188 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 ZNF480Q8WV37 535 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 POF1BQ8WVV4 589 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 CXorf40BQ96DE9 158 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 RNFT2Q96EX2 444 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 PDXPQ96GD0 296 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 RIOK2Q9BVS4 552 aaKnown RBP12.96□□□□□ -0.33
USP49-201ENST00000373006 SLAMF7Q9NQ25 335 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 NDOR1Q9UHB4 597 aa12.96□□□□□ -0.33
USP49-201ENST00000373006 CKAP5Q14008 2032 aa12.96□□□□□ -0.34
USP49-201ENST00000373006 ANHXE9PGG2 379 aa12.95□□□□□ -0.34
USP49-201ENST00000373006 GTPBP1O00178 669 aaKnown RBP12.95□□□□□ -0.34
USP49-201ENST00000373006 FAAHO00519 579 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms