RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 GALR3O60755 368 aaPredicted RBP23.5■■□□□ 1.35
CTSA-203ENST00000372459 PROS1P07225 676 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 BCKDHBP21953 392 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 ELK4P28324 431 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 POLR2IP36954 125 aaKnown RBP23.5■■□□□ 1.35
CTSA-203ENST00000372459 ESRRGP62508 458 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 LTB4RQ15722 352 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 LGI4Q8N135 537 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 OR4C15Q8NGM1 316 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 KAT2AQ92830 837 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 IL21RQ9HBE5 538 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 BCL2L10Q9HD36 194 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 GPC6Q9Y625 555 aaPredicted RBP23.5■■□□□ 1.35
CTSA-203ENST00000372459 KNL1Q8NG31 2342 aa23.5■■□□□ 1.35
CTSA-203ENST00000372459 LMO7DNF2Z398 122 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 J3KTA2 159 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 K7ESF4 209 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 RECKO95980 971 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 DCNP07585 359 aaKnown RBP23.49■■□□□ 1.35
CTSA-203ENST00000372459 KCNJ5P48544 419 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 PUM1Q14671 1186 aaKnown RBP eCLIP23.49■■□□□ 1.35
CTSA-203ENST00000372459 RBM48Q5RL73 367 aaKnown RBP23.49■■□□□ 1.35
CTSA-203ENST00000372459 USP53Q70EK8 1073 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 GPR141Q7Z602 305 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 C17orf82Q86X59 251 aaPredicted RBP23.49■■□□□ 1.35
CTSA-203ENST00000372459 GPR32P1Q8NGA4 272 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 APOBEC4Q8WW27 367 aaKnown RBP23.49■■□□□ 1.35
CTSA-203ENST00000372459 ZNF354BQ96LW1 612 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 OCEL1Q9H607 264 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 CEP192Q8TEP8 1941 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 ASNA1O43681 348 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 RYKP34925 604 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 KEAP1Q14145 624 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 DEFB133Q30KQ1 61 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 ZBED5Q49AG3 693 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 ZNF605Q86T29 641 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 TTC29Q8NA56 475 aaPredicted RBP23.49■■□□□ 1.35
CTSA-203ENST00000372459 SETD9Q8NE22 299 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 OR52J3Q8NH60 311 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 DNASE2BQ8WZ79 361 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 COL26A1Q96A83 441 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 OTUB1Q96FW1 271 aaPredicted RBP23.49■■□□□ 1.35
CTSA-203ENST00000372459 C16orf58Q96GQ5 468 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 OR7D2Q96RA2 312 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 SPATA5L1Q9BVQ7 753 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 NPLQ9BXD5 320 aaPredicted RBP23.49■■□□□ 1.35
CTSA-203ENST00000372459 STARD5Q9NSY2 213 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 TMEM74BQ9NUR3 256 aa23.49■■□□□ 1.35
CTSA-203ENST00000372459 SLC9B1P1A6NJY1 282 aa23.48■■□□□ 1.35
CTSA-203ENST00000372459 CSNK1EP49674 416 aaKnown RBP23.48■■□□□ 1.35
CTSA-203ENST00000372459 HLCSP50747 726 aa23.48■■□□□ 1.35
CTSA-203ENST00000372459 C21orf59P57076 290 aa23.48■■□□□ 1.35
CTSA-203ENST00000372459 DEFB110Q30KQ9 67 aa23.48■■□□□ 1.35
CTSA-203ENST00000372459 OR4N5Q8IXE1 308 aa23.48■■□□□ 1.35
CTSA-203ENST00000372459 DEFB123Q8N688 67 aa23.48■■□□□ 1.35
CTSA-203ENST00000372459 OR10G2Q8NGC3 310 aa23.48■■□□□ 1.35
CTSA-203ENST00000372459 HDAC2Q92769 488 aaKnown RBP23.48■■□□□ 1.35
CTSA-203ENST00000372459 BTBD2Q9BX70 525 aa23.48■■□□□ 1.35
CTSA-203ENST00000372459 EQTNQ9NQ60 294 aa23.48■■□□□ 1.35
CTSA-203ENST00000372459 HCRTR1O43613 425 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 CPMP14384 443 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 ISL1P61371 349 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 MICAQ29983 383 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 EXOC3L2Q2M3D2 409 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 PRAMEF8Q5VWM4 474 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 PRAMEF7Q5VXH5 474 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 MCATQ8IVS2 390 aaKnown RBP23.47■■□□□ 1.35
CTSA-203ENST00000372459 CA13Q8N1Q1 262 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 ACTRT3Q9BYD9 372 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 PRDM6Q9NQX0 595 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 NTMQ9P121 344 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 A0A0G2JPF8 293 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 HNRNPCL2B2RXH8 293 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 HNRNPCL3B7ZW38 293 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 GADD45GO95257 159 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 HNRNPCL4P0DMR1 293 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 CDK4P11802 303 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 CYP4B1P13584 511 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 ANXA8P13928 327 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 PORP16435 677 aaPredicted RBP23.47■■□□□ 1.35
CTSA-203ENST00000372459 HMGA2P52926 109 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 HPCAP84074 193 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 CD47Q08722 323 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 FUT5Q11128 374 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 OGFOD3Q6PK18 319 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 CHDHQ8NE62 594 aaPredicted RBP23.47■■□□□ 1.35
CTSA-203ENST00000372459 GIMAP5Q96F15 307 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 TCTN2Q96GX1 697 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 MAP3K3Q99759 626 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 ANKRA2Q9H9E1 313 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 ANKHQ9HCJ1 492 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 ACER3Q9NUN7 267 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 ABCA7Q8IZY2 2146 aa23.47■■□□□ 1.35
CTSA-203ENST00000372459 A8MVJ9 347 aa23.46■■□□□ 1.35
CTSA-203ENST00000372459 SRPX2O60687 465 aaPredicted RBP23.46■■□□□ 1.35
CTSA-203ENST00000372459 SDC3O75056 442 aa23.46■■□□□ 1.35
CTSA-203ENST00000372459 CHRM4P08173 479 aa23.46■■□□□ 1.35
CTSA-203ENST00000372459 TTKP33981 857 aa23.46■■□□□ 1.35
CTSA-203ENST00000372459 MAN2A2P49641 1150 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms