RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PGAM2P15259 253 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 PRKACGP22612 351 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR3A3P47888 321 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR3A2P47893 321 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 CXCL12P48061 93 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 SPINT3P49223 89 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 SPOCK1Q08629 439 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 LIPJQ5W064 366 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 PLXDC1Q8IUK5 500 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 IGDCC3Q8IVU1 814 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 TMEM104Q8NE00 496 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 THAP6Q8TBB0 222 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR5B12Q96R08 314 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 UBTD1Q9HAC8 227 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 MKS1Q9NXB0 559 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 MS4A12Q9NXJ0 267 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 HCFC2Q9Y5Z7 792 aa12.74□□□□□ -0.37
RAPGEF1-201ENST00000372189 ADAP00813 363 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 FCER2P06734 321 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 PPP1R8Q12972 351 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF676Q8N7Q3 588 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 TRUB1Q8WWH5 349 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLC41A3Q96GZ6 507 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 MUS81Q96NY9 551 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 EPYCQ99645 322 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 CCM2LQ9NUG4 571 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 HCN2Q9UL51 889 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 EXOSC1Q9Y3B2 195 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 TIAM2Q8IVF5 1701 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 GSTT2P0CG29 244 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 PTNP21246 168 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 RPA4Q13156 261 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 PUM1Q14671 1186 aaKnown RBP eCLIP12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF630Q2M218 657 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 CTC1Q2NKJ3 1217 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 SDC3O75056 442 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 GBAP04062 536 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 BCHEP06276 602 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 FHP07954 510 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 FUT4P22083 530 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 KCNJ5P48544 419 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 NRROSQ86YC3 692 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 CPXM2Q8N436 756 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR8D2Q9GZM6 311 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 NUDT15Q9NV35 164 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 CNOT11Q9UKZ1 510 aaKnown RBP12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 NRAPQ86VF7 1730 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 NDUFS8O00217 210 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 RCBTB2O95199 551 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 TFPTP0C1Z6 253 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 C1GALT1C1LP0DN25 315 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF41P51814 821 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 ARSKQ6UWY0 536 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLC22A15Q8IZD6 547 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 FCRL3Q96P31 734 aaPredicted RBP12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 B3GAT2Q9NPZ5 323 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 ARMC1Q9NVT9 282 aa12.73□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZBTB42B2RXF5 422 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 GPR89AB7ZAQ6 455 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 BHMG1C9JSJ3 638 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 CIDEAO60543 219 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 GPR89BP0CG08 455 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 RPS3P23396 243 aaKnown RBP eCLIP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF689Q96CS4 500 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLC46A2Q9BY10 475 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 FBP2O00757 339 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 RGS9O75916 674 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 CLIC3O95833 236 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 IFNA2P01563 188 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 MATN1P21941 496 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 CDKN1CP49918 316 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 TAS2R43P59537 309 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 RPS3AP61247 264 aaKnown RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 NIPAL4Q0D2K0 466 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 LRRN1Q6UXK5 716 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 GHDCQ8N2G8 530 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR4K14Q8NGD5 310 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 OR8J3Q8NGG0 315 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF675Q8TD23 568 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 HIST1H2AAQ96QV6 131 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 ENAMQ9NRM1 1142 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 ABCD2Q9UBJ2 740 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 ASGR2P07307 311 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 RPS15AP62244 130 aaKnown RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 SLC7A9P82251 487 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 MAD2L1BPQ15013 274 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 ZNF419Q96HQ0 510 aaPredicted RBP12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 HCN4Q9Y3Q4 1203 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 A6NCN8 305 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 PRAMEF26H0Y7S4 382 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 CDK2P24941 298 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 MAN2A2P49641 1150 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 ID2Q02363 134 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 HHEXQ03014 270 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 DSG2Q14126 1118 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 ESX1Q8N693 406 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 HCSTQ9UBK5 93 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 RARRES3Q9UL19 164 aa12.72□□□□□ -0.37
RAPGEF1-201ENST00000372189 HIDE1A8MVS5 230 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms