RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 GON4LQ3T8J9 2241 aa18.72■□□□□ 0.59
LHX3-202ENST00000371748 SCN2AQ99250 2005 aa18.72■□□□□ 0.59
LHX3-202ENST00000371748 USP34Q70CQ2 3546 aa18.72■□□□□ 0.59
LHX3-202ENST00000371748 ZNF99A8MXY4 864 aaPredicted RBP18.71■□□□□ 0.59
LHX3-202ENST00000371748 PCDH17O14917 1159 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 P2RX6O15547 441 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 IFNW1P05000 195 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 TSFMP43897 325 aaKnown RBP18.71■□□□□ 0.59
LHX3-202ENST00000371748 RGS1Q08116 209 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 MICAQ29983 383 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 TMEM107Q6UX40 140 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 SLCO6A1Q86UG4 719 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 GAL3ST3Q96A11 431 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 NIPSNAP1Q9BPW8 284 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 PCDHGB1Q9Y5G3 927 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 SLCO1B1Q9Y6L6 691 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 MAN1A2O60476 641 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 CCDC159P0C7I6 412 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 ACVR2AP27037 513 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 EIF2B2P49770 351 aaKnown RBP18.71■□□□□ 0.59
LHX3-202ENST00000371748 FCRL6Q6DN72 434 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 ZNF605Q86T29 641 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 GPBAR1Q8TDU6 330 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 UTP15Q8TED0 518 aaKnown RBP18.71■□□□□ 0.59
LHX3-202ENST00000371748 APOBEC4Q8WW27 367 aaKnown RBP18.71■□□□□ 0.59
LHX3-202ENST00000371748 TREX2Q9BQ50 279 aaPredicted RBP18.71■□□□□ 0.59
LHX3-202ENST00000371748 CCDC90BQ9GZT6 254 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 RASSF1Q9NS23 344 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 CPNE7Q9UBL6 633 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 P2RX2Q9UBL9 471 aa18.71■□□□□ 0.59
LHX3-202ENST00000371748 SLC35G6P0C7Q6 338 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 LIM2P55344 173 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 TGM3Q08188 693 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 EIF2B5Q13144 721 aaKnown RBP18.7■□□□□ 0.58
LHX3-202ENST00000371748 LASP1Q14847 261 aaKnown RBP18.7■□□□□ 0.58
LHX3-202ENST00000371748 SMN1Q16637 294 aaKnown RBP18.7■□□□□ 0.58
LHX3-202ENST00000371748 LINC00299Q6ZSB3 139 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 CADM3Q8N126 398 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 RLN3Q8WXF3 142 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 COL21A1Q96P44 957 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 OR2A5Q96R48 311 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 GABARAPL3Q9BY60 117 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 ANKRA2Q9H9E1 313 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 SEMA3GQ9NS98 782 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 ZSCAN32Q9NX65 697 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 HSPE1-MOB4S4R3N1 261 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 GADD45GO95257 159 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 THEGLP0DJG4 465 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 NR2F1P10589 423 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 PVRP15151 417 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 RHCEP18577 417 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 DGKEP52429 567 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 MAD2L1BPQ15013 274 aaPredicted RBP18.7■□□□□ 0.58
LHX3-202ENST00000371748 FIGLAQ6QHK4 219 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 TSPYL5Q86VY4 417 aaPredicted RBP18.7■□□□□ 0.58
LHX3-202ENST00000371748 ZNF761Q86XN6 746 aaPredicted RBP18.7■□□□□ 0.58
LHX3-202ENST00000371748 FAM160A2Q8N612 972 aaPredicted RBP18.7■□□□□ 0.58
LHX3-202ENST00000371748 NT5CQ8TCD5 201 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 ZNF566Q969W8 418 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 GIN1Q9NXP7 522 aa18.7■□□□□ 0.58
LHX3-202ENST00000371748 PDE9AO76083 593 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 HMGN2P05204 90 aaKnown RBP18.69■□□□□ 0.58
LHX3-202ENST00000371748 CSNK2A2P19784 350 aaPredicted RBP18.69■□□□□ 0.58
LHX3-202ENST00000371748 CD6P30203 668 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 CCR5P51681 352 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 C1orf61Q13536 156 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 CCDC85BQ15834 202 aaPredicted RBP18.69■□□□□ 0.58
LHX3-202ENST00000371748 CHRDL2Q6WN34 429 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 HMGN2P46Q86SG4 172 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 MFSD4AQ8N468 514 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 OR9A2Q8NGT5 310 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 VANGL1Q8TAA9 524 aaPredicted RBP18.69■□□□□ 0.58
LHX3-202ENST00000371748 NDNFQ8TB73 568 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 PROX1Q92786 737 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 PITX2Q99697 317 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 WFDC6Q9BQY6 131 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 LYARQ9NX58 379 aaKnown RBP18.69■□□□□ 0.58
LHX3-202ENST00000371748 SEC14L3Q9UDX4 400 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 LOC105369274A0A096LPK9 316 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 LOC102723532A0A0G2JNH3 316 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 FFAR1O14842 300 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 TNFSF14O43557 240 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 IGLV3-19P01714 112 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 POU2F1P14859 743 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 TGM1P22735 817 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 LIMS1P48059 325 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 LSSP48449 732 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 TMED10P49755 219 aaKnown RBP18.69■□□□□ 0.58
LHX3-202ENST00000371748 SMAD4Q13485 552 aaKnown RBP18.69■□□□□ 0.58
LHX3-202ENST00000371748 DEFB134Q4QY38 66 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 FRMPD2BQ6IN97 320 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 TMEM64Q6YI46 380 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 TAF8Q7Z7C8 310 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 RBM45Q8IUH3 476 aaKnown RBP18.69■□□□□ 0.58
LHX3-202ENST00000371748 OR4N4Q8N0Y3 316 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 SLC37A2Q8TED4 501 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 PHF10Q8WUB8 498 aaKnown RBP18.69■□□□□ 0.58
LHX3-202ENST00000371748 S100ZQ8WXG8 99 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 TM4SF19Q96DZ7 209 aa18.69■□□□□ 0.58
LHX3-202ENST00000371748 C16orf58Q96GQ5 468 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms