RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PACS2Q86VP3 889 aa14.84□□□□□ -0.03
VMA21-202ENST00000370361 SAMD14Q8IZD0 417 aaPredicted RBP14.84□□□□□ -0.03
VMA21-202ENST00000370361 PLD6Q8N2A8 252 aaKnown RBP14.84□□□□□ -0.03
VMA21-202ENST00000370361 OR5M9Q8NGP3 310 aa14.84□□□□□ -0.03
VMA21-202ENST00000370361 MTBPQ96DY7 904 aa14.84□□□□□ -0.03
VMA21-202ENST00000370361 FAIM2Q9BWQ8 316 aa14.84□□□□□ -0.03
VMA21-202ENST00000370361 SHCBP1LQ9BZQ2 653 aa14.84□□□□□ -0.03
VMA21-202ENST00000370361 NPDC1Q9NQX5 325 aaPredicted RBP14.84□□□□□ -0.03
VMA21-202ENST00000370361 TRPS1Q9UHF7 1281 aa14.84□□□□□ -0.03
VMA21-202ENST00000370361 NFU1Q9UMS0 254 aa14.84□□□□□ -0.03
VMA21-202ENST00000370361 FAM215AQ9Y5M1 114 aa14.84□□□□□ -0.03
VMA21-202ENST00000370361 NPFFR2Q9Y5X5 522 aa14.84□□□□□ -0.03
VMA21-202ENST00000370361 INTS1Q8N201 2190 aaKnown RBP14.83□□□□□ -0.04
VMA21-202ENST00000370361 CSMD2Q7Z408 3487 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 LRRC3CA6NJW4 275 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 ACOX3O15254 700 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 PRKRAO75569 313 aaKnown RBP14.83□□□□□ -0.04
VMA21-202ENST00000370361 ATP1B1P05026 303 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 KLK1P06870 262 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 ABHD2P08910 425 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 SNRPAP09012 282 aaKnown RBP14.83□□□□□ -0.04
VMA21-202ENST00000370361 KRT15P19012 456 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 TAC1P20366 129 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 XKP51811 444 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 PRAMEF20Q5VT98 475 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 CCDC71Q8IV32 467 aaPredicted RBP14.83□□□□□ -0.04
VMA21-202ENST00000370361 IFT20Q8IY31 132 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 VWA5B2Q8N398 1253 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 ZNF615Q8N8J6 731 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 SPPL2AQ8TCT8 520 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 ZNF483Q8TF39 744 aaPredicted RBP14.83□□□□□ -0.04
VMA21-202ENST00000370361 DIO2Q92813 273 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 ERP27Q96DN0 273 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 CDK15Q96Q40 435 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 ZNF559Q9BR84 538 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 OR10A5Q9H207 317 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 ZBTB26Q9HCK0 441 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 TEX10Q9NXF1 929 aaPredicted RBP14.83□□□□□ -0.04
VMA21-202ENST00000370361 PCDHA9Q9Y5H5 950 aa14.83□□□□□ -0.04
VMA21-202ENST00000370361 TACC2O95359 2948 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 NKX2-6A6NCS4 301 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 PGRMC2O15173 223 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 CLPSP04118 112 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 CSNK2A2P19784 350 aaPredicted RBP14.82□□□□□ -0.04
VMA21-202ENST00000370361 NT5EP21589 574 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 GCKP35557 465 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 DEKP35659 375 aaKnown RBP14.82□□□□□ -0.04
VMA21-202ENST00000370361 NR0B1P51843 470 aaKnown RBP14.82□□□□□ -0.04
VMA21-202ENST00000370361 DCAF7P61962 342 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 MAP4K2Q12851 820 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 SNTA1Q13424 505 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 RASA2Q15283 850 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 RTL6Q6ICC9 239 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 SLC48A1Q6P1K1 146 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 SPNS3Q6ZMD2 512 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 TIFABQ6ZNK6 161 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 COMMD6Q7Z4G1 85 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 RPRMLQ8N4K4 120 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 LRRN4CLQ8ND94 238 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 OR4F6Q8NGB9 312 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 SELENOMQ8WWX9 145 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 SREK1Q8WXA9 508 aaKnown RBP14.82□□□□□ -0.04
VMA21-202ENST00000370361 ADIPOR1Q96A54 375 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 HSPBAP1Q96EW2 488 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 TMEM41AQ96HV5 264 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 ANGPTL4Q9BY76 406 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 MRPL1Q9BYD6 325 aaKnown RBP14.82□□□□□ -0.04
VMA21-202ENST00000370361 PROK2Q9HC23 129 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 SEMA4BQ9NPR2 832 aaPredicted RBP14.82□□□□□ -0.04
VMA21-202ENST00000370361 TNFRSF10DQ9UBN6 386 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 PRODH2Q9UF12 536 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 FOXD3Q9UJU5 478 aaPredicted RBP14.82□□□□□ -0.04
VMA21-202ENST00000370361 SLC12A4Q9UP95 1085 aa14.82□□□□□ -0.04
VMA21-202ENST00000370361 ANKRD17O75179 2603 aaKnown RBP14.82□□□□□ -0.04
VMA21-202ENST00000370361 CCDC168Q8NDH2 2452 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 A0A0G2JNJ9 132 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 CCDC151A5D8V7 595 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 TRIM49D1C9J1S8 452 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 BCAS2O75934 225 aaPredicted RBP14.81□□□□□ -0.04
VMA21-202ENST00000370361 KRT6AP02538 564 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 GBAP04062 536 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 KRT6BP04259 564 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 HPNP05981 417 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 CELA3AP09093 270 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 RHOXF2BP0C7M4 288 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 ENDOUP21128 410 aaKnown RBP14.81□□□□□ -0.04
VMA21-202ENST00000370361 GDF1P27539 372 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 SSTR4P31391 388 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 GSTM5P46439 218 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 KRT6CP48668 564 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 MASP1P48740 699 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 NAA20P61599 178 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 CSTF3Q12996 717 aaKnown RBP14.81□□□□□ -0.04
VMA21-202ENST00000370361 NHSL2Q5HYW2 709 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 LACC1Q8IV20 430 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 SLC22A9Q8IVM8 553 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 DCAKDQ8WVC6 231 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 JSRP1Q96MG2 331 aaPredicted RBP14.81□□□□□ -0.04
VMA21-202ENST00000370361 RILPQ96NA2 401 aa14.81□□□□□ -0.04
VMA21-202ENST00000370361 RHOXF2Q9BQY4 288 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms