RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 HLA-DQA1Q5Y7H0 255 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 FRG2Q64ET8 278 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 BICRALQ6AI39 1079 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 POMZP3Q6PJE2 187 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 GALNT12Q8IXK2 581 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 PTGR2Q8N8N7 351 aaPredicted RBP14.67□□□□□ -0.06
CKS1B-202ENST00000368436 NAXEQ8NCW5 288 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 C17orf47Q8NEP4 570 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 TNIP2Q8NFZ5 429 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 OR7G1Q8NGA0 311 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 NINJ1Q92982 152 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 RILPQ96NA2 401 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 FRG2BQ96QU4 278 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 SH3GL2Q99962 352 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 PRDM14Q9GZV8 571 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 VPS11Q9H270 941 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 CXXC4Q9H2H0 198 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 ZNF358Q9NW07 568 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 KIAA1549Q9HCM3 1950 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 ITPR3Q14573 2671 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 ESYT3A0FGR9 886 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 KDM4EB2RXH2 506 aaPredicted RBP14.66□□□□□ -0.06
CKS1B-202ENST00000368436 STX16-NPEPL1H3BU86 382 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 STX16O14662 325 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 ACSL3O95573 720 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 KLK1P06870 262 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 CPMP14384 443 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 S1PR1P21453 382 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 PHBP35232 272 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 CASP3P42574 277 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 MAGEA12P43365 314 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 TMED10P49755 219 aaKnown RBP14.66□□□□□ -0.06
CKS1B-202ENST00000368436 ASCL1P50553 236 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 XKP51811 444 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 CCNG1P51959 295 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 UAP1Q16222 522 aaPredicted RBP14.66□□□□□ -0.06
CKS1B-202ENST00000368436 VASNQ6EMK4 673 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 PACS2Q86VP3 889 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 LACC1Q8IV20 430 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 PM20D2Q8IYS1 436 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 METTL4Q8N3J2 472 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 TRPC4APQ8TEL6 797 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 ANP32BQ92688 251 aaKnown RBP14.66□□□□□ -0.06
CKS1B-202ENST00000368436 RNASE6Q93091 150 aaKnown RBP14.66□□□□□ -0.06
CKS1B-202ENST00000368436 ATP6V1E2Q96A05 226 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 ISL2Q96A47 359 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 TMEM41AQ96HV5 264 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 GNRHR2Q96P88 292 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 FOXC2Q99958 501 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 POLDIP3Q9BY77 421 aaKnown RBP14.66□□□□□ -0.06
CKS1B-202ENST00000368436 FUT8Q9BYC5 575 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 ACSS3Q9H6R3 686 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 ZBTB26Q9HCK0 441 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 RASSF1Q9NS23 344 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 AHSPQ9NZD4 102 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 ZNF629Q9UEG4 869 aaPredicted RBP14.66□□□□□ -0.06
CKS1B-202ENST00000368436 PCTPQ9UKL6 214 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 CES1P1Q9UKY3 287 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 TMCO1Q9UM00 188 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 C15orf41Q9Y2V0 281 aa14.66□□□□□ -0.06
CKS1B-202ENST00000368436 DVL2O14641 736 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 TRAPPC6AO75865 159 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 ABCB1P08183 1280 aaPredicted RBP14.65□□□□□ -0.06
CKS1B-202ENST00000368436 RBP1P09455 135 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 PORP16435 677 aaPredicted RBP14.65□□□□□ -0.06
CKS1B-202ENST00000368436 NAGAP17050 411 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 NT5EP21589 574 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 GPX3P22352 226 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 ABCD3P28288 659 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 UQCRC1P31930 480 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 NRG3P56975 720 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 RPP38P78345 283 aaKnown RBP14.65□□□□□ -0.06
CKS1B-202ENST00000368436 SLC7A5Q01650 507 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 MGAT2Q10469 447 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 TRAF3Q13114 568 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 SNTB1Q13884 538 aaKnown RBP14.65□□□□□ -0.06
CKS1B-202ENST00000368436 GGTA1PQ4G0N0 100 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 UBAP2Q5T6F2 1119 aaKnown RBP14.65□□□□□ -0.06
CKS1B-202ENST00000368436 SYT10Q6XYQ8 523 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 PAGE2Q7Z2X7 111 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 RELL1Q8IUW5 271 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 PHF21BQ96EK2 531 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 TMUB1Q9BVT8 246 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 MRPL1Q9BYD6 325 aaKnown RBP14.65□□□□□ -0.06
CKS1B-202ENST00000368436 NINJ2Q9NZG7 142 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 CRIM1Q9NZV1 1036 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 FETUBQ9UGM5 382 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 PCDHA9Q9Y5H5 950 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 DOCK7Q96N67 2140 aa14.65□□□□□ -0.06
CKS1B-202ENST00000368436 ANKHD1Q8IWZ3 2542 aaKnown RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 CD8B2A6NJW9 211 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 CDH16O75309 829 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 BMP7P18075 431 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 BMP5P22003 454 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 ARL1P40616 181 aaPredicted RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 ZNF136P52737 540 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 WNT3P56703 355 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 MAP4K2Q12851 820 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 SF3B4Q15427 424 aaKnown RBP eCLIP14.64□□□□□ -0.074e-8■□□□□ 8.6
CKS1B-202ENST00000368436 PRICKLE4Q2TBC4 344 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms