RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 STK25O00506 426 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 HBQ1P09105 142 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 HNRNPCL4P0DMR1 293 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 CPEP16870 476 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 TNNI3P19429 210 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 HOXD12P35452 270 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 IFNGR2P38484 337 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 GIPRP48546 466 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SMSP52788 366 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 PSPHP78330 225 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 EFNB1P98172 346 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 CDK5Q00535 292 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 DMPKQ09013 629 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 FOXD4Q12950 439 aaPredicted RBP13.5□□□□□ -0.25
CD48-201ENST00000368045 GINS1Q14691 196 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 LRRC26Q2I0M4 334 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 GAB4Q2WGN9 574 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SYT14P1Q58G82 188 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 NDUFAF5Q5TEU4 345 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 IL17RDQ8NFM7 739 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 XAGE5Q8WWM1 108 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SLC35B4Q969S0 331 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 ZNF707Q96C28 371 aaPredicted RBP13.5□□□□□ -0.25
CD48-201ENST00000368045 RAB11FIP5Q9BXF6 653 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 PINK1Q9BXM7 581 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 BARHL1Q9BZE3 327 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 HOXD1Q9GZZ0 328 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 MVB12BQ9H7P6 319 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 ZCCHC3Q9NUD5 404 aaKnown RBP13.5□□□□□ -0.25
CD48-201ENST00000368045 C5AR2Q9P296 337 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 TRPC4Q9UBN4 977 aa13.5□□□□□ -0.25
CD48-201ENST00000368045 SYT5O00445 386 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 MAN2B1O00754 1011 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 PRKYO43930 277 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 MMP11P24347 488 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 PSMB5P28074 263 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
CD48-201ENST00000368045 DGKEP52429 567 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 TAS2R38P59533 333 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 BNC1Q01954 994 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 PRDX1Q06830 199 aaKnown RBP13.49□□□□□ -0.25
CD48-201ENST00000368045 MESP2Q0VG99 397 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 PIN1Q13526 163 aaPredicted RBP13.49□□□□□ -0.25
CD48-201ENST00000368045 ZIC1Q15915 447 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 DUSP6Q16828 381 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 ZNF544Q6NX49 715 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 ZER1Q7Z7L7 766 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 MRGPREQ86SM8 312 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 MMAAQ8IVH4 418 aaKnown RBP13.49□□□□□ -0.25
CD48-201ENST00000368045 FAM181AQ8N9Y4 354 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 OR56A1Q8NGH5 318 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 OR52I1Q8NGK6 324 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 ASB15Q8WXK1 588 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 SUSD6Q92537 303 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 FGF11Q92914 225 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 RSPRY1Q96DX4 576 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 ZNF582Q96NG8 517 aaPredicted RBP13.49□□□□□ -0.25
CD48-201ENST00000368045 OR2A14Q96R47 310 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 BBS4Q96RK4 519 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 MED18Q9BUE0 208 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 PRRG3Q9BZD7 231 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 FGF20Q9NP95 211 aaPredicted RBP13.49□□□□□ -0.25
CD48-201ENST00000368045 MAN2C1Q9NTJ4 1040 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 CMAHPQ9Y471 501 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 KIAA1549LQ6ZVL6 1849 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 MUC22E2RYF6 1773 aaPredicted RBP13.49□□□□□ -0.25
CD48-201ENST00000368045 NOTCH4Q99466 2003 aa13.49□□□□□ -0.25
CD48-201ENST00000368045 TMEM129A0AVI4 362 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 LRIT2A6NDA9 550 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 H3BQ06 376 aaPredicted RBP13.48□□□□□ -0.25
CD48-201ENST00000368045 M0R3H8 397 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 TLX2O43763 284 aaPredicted RBP13.48□□□□□ -0.25
CD48-201ENST00000368045 PCCBP05166 539 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 MYL12AP19105 171 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 VEGFBP49765 207 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 CLCNKAP51800 687 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 NCBP2P52298 156 aaKnown RBP eCLIP13.48□□□□□ -0.25
CD48-201ENST00000368045 RAB40BQ12829 278 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 SLC9A5Q14940 896 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 LARS2Q15031 903 aaKnown RBP13.48□□□□□ -0.25
CD48-201ENST00000368045 AGERQ15109 404 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 TMEM53Q6P2H8 277 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 OR8H2Q8N162 312 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 MORN4Q8NDC4 146 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 GNPDA2Q8TDQ7 276 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 SLC25A46Q96AG3 418 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 TEX101Q9BY14 249 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 ANKRD19PQ9H560 264 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 SNTG1Q9NSN8 517 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 TBC1D24Q9ULP9 559 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 V9GYH0 126 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 RGS5O15539 181 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 ACP2P11117 423 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 RAB28P51157 221 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 WNT4P56705 351 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 NDUFA5Q16718 116 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 TMEM44Q2T9K0 475 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 WSCD2Q2TBF2 565 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 CCDC92Q53HC0 331 aaPredicted RBP13.48□□□□□ -0.25
CD48-201ENST00000368045 PIP5KL1Q5T9C9 394 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms