RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ARL4DP49703 201 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 CDK9P50750 372 aaKnown RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 DUSP3P51452 185 aaPredicted RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 GRM7Q14831 915 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 PERM1Q5SV97 790 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 FAM180BQ6P0A1 224 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 DHRS13Q6UX07 377 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 TMEM64Q6YI46 380 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 GLRX5Q86SX6 157 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 ICA1LQ8NDH6 482 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 SUN3Q8TAQ9 357 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 NEURL3Q96EH8 262 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 ZNF681Q96N22 645 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 NUDT22Q9BRQ3 303 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 EFHD1Q9BUP0 239 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 EPS8L2Q9H6S3 715 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 SIRT3Q9NTG7 399 aaPredicted RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 CCM2LQ9NUG4 571 aaPredicted RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 ARMC1Q9NVT9 282 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 GPATCH2Q9NW75 528 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 C6orf203Q9P0P8 240 aaPredicted RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 TMEM9Q9P0T7 183 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 RSL24D1Q9UHA3 163 aaKnown RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 AP4S1Q9Y587 144 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 HYKKA2RU49 373 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 FUOMA2VDF0 154 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 H3BMH7 237 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 CXCR6O00574 342 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 CYR61O00622 381 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 ERAL1O75616 437 aaKnown RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 NTRK1P04629 796 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 OCM2P0CE71 109 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 OCMP0CE72 109 aaPredicted RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 CHI3L1P36222 383 aaPredicted RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 NCBP2P52298 156 aaKnown RBP eCLIP11.35□□□□□ -0.591e-7■■■■□ 26
USF1-203ENST00000368021 HSPB3Q12988 150 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 VEZF1Q14119 521 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 PDK3Q15120 406 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 VMACQ2NL98 169 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 TMTC4Q5T4D3 741 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 SAXO2Q658L1 398 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 PTOV1Q86YD1 416 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 MARCH9Q86YJ5 346 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 ZZZ3Q8IYH5 903 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 CA13Q8N1Q1 262 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 OR4D9Q8NGE8 314 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 PNPT1Q8TCS8 783 aaKnown RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 ADAMTS18Q8TE60 1221 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 GIPC3Q8TF64 312 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 CANT1Q8WVQ1 401 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 MED30Q96HR3 178 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 SEMA3GQ9NS98 782 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 CRNNQ9UBG3 495 aaPredicted RBP11.35□□□□□ -0.59
USF1-203ENST00000368021 SNX8Q9Y5X2 465 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 DMXL2Q8TDJ6 3036 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 KNTC1P50748 2209 aa11.35□□□□□ -0.59
USF1-203ENST00000368021 SEC16AO15027 2179 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 RNF103-CHMP3A0A140T963 221 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 A0A1W2PQM1 296 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 BLACEA4D250 179 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 ZNF860A6NHJ4 632 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 WASHC1A8K0Z3 465 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 SGK494L7N484 410 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 CASQ2O14958 399 aaPredicted RBP11.34□□□□□ -0.59
USF1-203ENST00000368021 FOXS1O43638 330 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 HYAL3O43820 417 aaPredicted RBP11.34□□□□□ -0.59
USF1-203ENST00000368021 BAG2O95816 211 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 C1QCP02747 245 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 BMP2P12643 396 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 HOXB6P17509 224 aaKnown RBP11.34□□□□□ -0.59
USF1-203ENST00000368021 SOAT1P35610 550 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 SEPHS1P49903 392 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 RAB38P57729 211 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 RBBP4Q09028 425 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 FAM214AQ32MH5 1076 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.34□□□□□ -0.59
USF1-203ENST00000368021 BHLHB9Q6PI77 547 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 RNF111Q6ZNA4 994 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 ERMP1Q7Z2K6 904 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 CLEC4FQ8N1N0 589 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 PQLC1Q8N2U9 271 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 TTC29Q8NA56 475 aaPredicted RBP11.34□□□□□ -0.59
USF1-203ENST00000368021 OR4K14Q8NGD5 310 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 OR9A4Q8NGU2 314 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 SFXN5Q8TD22 340 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 FIG4Q92562 907 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 TANKQ92844 425 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 SLCO4A1Q96BD0 722 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 MOAP1Q96BY2 351 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 MVB12AQ96EY5 273 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 CSF3RQ99062 836 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 NDEL1Q9GZM8 345 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 LRRN3Q9H3W5 708 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 TMEM38AQ9H6F2 299 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 RABL2BQ9UNT1 228 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 CFAP47Q6ZTR5 3102 aa11.34□□□□□ -0.59
USF1-203ENST00000368021 FAM149AA5PLN7 773 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 CCDC160A6NGH7 325 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 H0YIG0 161 aa11.33□□□□□ -0.6
USF1-203ENST00000368021 DNAJB6O75190 326 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms