RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ACSBG2Q5FVE4 666 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 C1orf186Q6ZWK4 172 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SYS1Q8N2H4 156 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GPR174Q9BXC1 333 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 NFKBIEO00221 500 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CDC40O60508 579 aaKnown RBP eCLIP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MT-ND4LP03901 98 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 IRF2BP2Q7Z5L9 587 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GPSM1Q86YR5 675 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 C15orf54Q8N8G6 183 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ORAI1Q96D31 301 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TM6SF2Q9BZW4 377 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SPG21Q9NZD8 308 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GIMD1P0DJR0 217 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 Q3ZCU0 254 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM135Q86UB9 458 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 POC1BQ8TC44 478 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CXorf58Q96LI9 332 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RHNO1Q9BSD3 238 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MROH2AA6NES4 1674 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 A8MXE2 369 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 H7C417 338 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RFXANKO14593 260 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DRD2P14416 443 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SNCAP37840 140 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 AFF1P51825 1210 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ECH1Q13011 328 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ABRAXAS2Q15018 415 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM104Q8NE00 496 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RNF38Q9H0F5 515 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OR5AC2Q9NZP5 309 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 B4E171 279 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PRRG1O14668 218 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 LCN6P62502 163 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 NKX3-2P78367 333 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 FAM217AQ8IXS0 508 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CBARPQ8N350 705 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TCEANCQ8N8B7 351 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 C10orf35Q96D05 121 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 NIPSNAP3BQ9BS92 247 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RHOQP17081 205 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CPT1AP50416 773 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TCL1AP56279 114 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SEC61A1P61619 476 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 NKAIN1Q4KMZ8 207 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 FAM171A1Q5VUB5 890 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 YOD1Q5VVQ6 348 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SMPDL3AQ92484 453 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PYURFQ96I23 114 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 HRASLS5Q96KN8 279 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PXMP2Q9NR77 195 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ACSS1Q9NUB1 689 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 FBXO5Q9UKT4 447 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ABCD3P28288 659 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 INPP5JQ15735 1006 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 C17orf107Q6ZR85 190 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 OR10Z1Q8NGY1 313 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 HDAC10Q969S8 669 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PLD4Q96BZ4 506 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SARDHQ9UL12 918 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CXCL11O14625 94 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 KCNK2O95069 426 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF37AP17032 561 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 UBA1P22314 1058 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 RANBP10Q6VN20 620 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 FAM71CQ8NEG0 241 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 GPRC5AQ8NFJ5 357 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ANKRD49Q8WVL7 239 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM38AQ9H6F2 299 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 DNMT3LQ9UJW3 386 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PRSS51A0A1B0GVH4 220 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ANXA2P2A6NMY6 339 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ABCD4O14678 606 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ANXA2P07355 339 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 FGF7P21781 194 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ADORA2AP29274 412 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 OTUD3Q5T2D3 398 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 WDR73Q6P4I2 378 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CMTM1Q8IZ96 169 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 RDH10Q8IZV5 341 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 CADM1Q9BY67 442 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SAP130Q9H0E3 1048 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 RGCCQ9H4X1 137 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 GPR173Q9NS66 373 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TARBP1Q13395 1621 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 C2orf92A0A1B0GVN3 265 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PRKACBP22694 351 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 ADORA2BP29275 332 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 KCNJ11Q14654 390 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 BATFQ16520 125 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 DUSP7Q16829 419 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 SLC8B1Q6J4K2 584 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PCSK9Q8NBP7 692 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 UPRTQ96BW1 309 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TSNAXQ99598 290 aaKnown RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 B3GNT4Q9C0J1 378 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM181Q9P2C4 612 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 PI15O43692 258 aa3.59□□□□□ -1.83
SYNE1-207ENST00000367255 KLF8O95600 359 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-207ENST00000367255 IFNGR1P15260 489 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms