RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 RRNAD1Q96FB5 475 aaKnown RBP15□□□□□ -0.01
NUCKS1-201ENST00000367142 NID2Q14112 1375 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 CLCA1A8K7I4 914 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 KLF11O14901 512 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 CD40LGP29965 261 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 BMPR1AP36894 532 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 AKR1C2P52895 323 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 ERVK-16P61578 105 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 RABL3Q5HYI8 236 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 ZDHHC24Q6UX98 284 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 OR5B12Q96R08 314 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 ZNF487B1APH4 448 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 RGS9O75916 674 aaPredicted RBP15□□□□□ -0.01
NUCKS1-201ENST00000367142 OXSR1O95747 527 aaPredicted RBP15□□□□□ -0.01
NUCKS1-201ENST00000367142 SNAI1O95863 264 aaPredicted RBP15□□□□□ -0.01
NUCKS1-201ENST00000367142 CD63P08962 238 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 EXOC3L2Q2M3D2 409 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 SLC16A9Q7RTY1 509 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 SYNPOQ8N3V7 929 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 CLEC1AQ8NC01 280 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 F2RL3Q96RI0 385 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 POTEKPQ9BYX7 375 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 CPEB1Q9BZB8 566 aaKnown RBP15□□□□□ -0.01
NUCKS1-201ENST00000367142 MKS1Q9NXB0 559 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 KLHL13Q9P2N7 655 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 ACSL6Q9UKU0 697 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 PROS1P07225 676 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 ADRB3P13945 408 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 OLIG2Q13516 323 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 TMEM201Q5SNT2 666 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 TMEM139Q8IV31 216 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 FKBP10Q96AY3 582 aa15□□□□□ -0.01
NUCKS1-201ENST00000367142 SHC2P98077 582 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 OR1A2Q9Y585 309 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 ALDOAP04075 364 aaKnown RBP14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 TXNRD3NBQ6F5E7 133 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 NEIL3Q8TAT5 605 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 MAFIPQ8WZ33 124 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 ZUFSPQ96AP4 578 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 MYRFLQ96LU7 910 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 NELL2Q99435 816 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 PAK1IP1Q9NWT1 392 aaPredicted RBP14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 AJAP1Q9UKB5 411 aaPredicted RBP14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 C2orf78A6NCI8 922 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 GCGRP47871 477 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 CNPY1Q3B7I2 92 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 UGT2A3Q6UWM9 527 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 ZNF572Q7Z3I7 529 aaPredicted RBP14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 SLC5A8Q8N695 610 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 RHBDF1Q96CC6 855 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 IL17FQ96PD4 163 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 PRLP01236 227 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 GRPRP30550 384 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 NFE2L1Q14494 772 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 MFSD13AQ14CX5 517 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 LPAL2Q16609 132 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 LRRC37A5PQ49AS3 106 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 DCP2Q8IU60 420 aaKnown RBP14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 OR9I1Q8NGQ6 314 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 SFXN2Q96NB2 322 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 TEX264Q9Y6I9 313 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 SMIM30A4D0T7 59 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 BEST1O76090 585 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 MT-CO2P00403 227 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 CD1DP15813 335 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 RAB11BQ15907 218 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 RANBP9Q96S59 729 aa14.99□□□□□ -0.01
NUCKS1-201ENST00000367142 TRAV6A0A075B6T7 132 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 TRBV2A0A0J9YWF9 115 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 DRD1P21728 446 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 SLC18A1P54219 525 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 HSD17B7P56937 341 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 OR2T4Q8NH00 348 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 ZNF675Q8TD23 568 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 MEN1O00255 615 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 SHOXO15266 292 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 CYB5BO43169 146 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 GLSO94925 669 aaPredicted RBP14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 HNRNPA2B1P22626 353 aaKnown RBP14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 TAS2R38P59533 333 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 BTBD16Q32M84 506 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 FIGNL1Q6PIW4 674 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 CRTC1Q6UUV9 634 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 IMP4Q96G21 291 aaKnown RBP14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 PKP2Q99959 881 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 RANBP3Q9H6Z4 567 aaPredicted RBP14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 MCTS1Q9ULC4 181 aaKnown RBP14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 ZNF840PA6NDX5 716 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 CDK2P24941 298 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 NIPAL4Q0D2K0 466 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 UGT8Q16880 541 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 RPS27LQ71UM5 84 aaKnown RBP14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 SLC22A16Q86VW1 577 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 GLYATL2Q8WU03 294 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 TSPEARQ8WU66 669 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 SECISBP2Q96T21 854 aaKnown RBP14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 MEPEQ9NQ76 525 aaPredicted RBP14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 SLITRK5O94991 958 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 LEG1Q6P5S2 330 aa14.98□□□□□ -0.01
NUCKS1-201ENST00000367142 ZNF773Q6PK81 442 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms