RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CITED4Q96RK1 184 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 FAM129BQ96TA1 746 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 DHRS9Q9BPW9 319 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 MKRN2Q9H000 416 aaKnown RBP13.94□□□□□ -0.18
PRKN-204ENST00000366896 SPNS1Q9H2V7 528 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 FZD3Q9NPG1 666 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 SEC14L4Q9UDX3 406 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 KLHL21Q9UJP4 597 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 SATB2Q9UPW6 733 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 PCM1Q15154 2024 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 FAM227AF5H4B4 570 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 GADD45GO95257 159 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 CISD3P0C7P0 127 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 NPPBP16860 134 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 IL12RB1P42701 662 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 GZMKP49863 264 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 TMEM115Q12893 351 aaPredicted RBP13.94□□□□□ -0.18
PRKN-204ENST00000366896 TNK1Q13470 666 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 LARS2Q15031 903 aaKnown RBP13.94□□□□□ -0.18
PRKN-204ENST00000366896 SLC5A12Q1EHB4 618 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 RNLSQ5VYX0 342 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 HIST2H2AA3Q6FI13 130 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 FRMPD2BQ6IN97 320 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 ZNF770Q6IQ21 691 aaPredicted RBP13.94□□□□□ -0.18
PRKN-204ENST00000366896 PTCRAQ6ISU1 281 aaPredicted RBP13.94□□□□□ -0.18
PRKN-204ENST00000366896 FAM180BQ6P0A1 224 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 FAM131AQ6UXB0 335 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 NATD1Q8N6N6 113 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 OR5H6Q8NGV6 325 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 UBASH3BQ8TF42 649 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 UBE2E3Q969T4 207 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 TRMT61AQ96FX7 289 aaKnown RBP13.94□□□□□ -0.18
PRKN-204ENST00000366896 PPP1R16AQ96I34 528 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 CLN6Q9NWW5 311 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 GULP1Q9UBP9 304 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 ITM2BQ9Y287 266 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 DYRK1BQ9Y463 629 aa13.94□□□□□ -0.18
PRKN-204ENST00000366896 PRUNE2Q8WUY3 3088 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 RECKO95980 971 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 PSMA1P25786 263 aaKnown RBP13.93□□□□□ -0.18
PRKN-204ENST00000366896 ITGB7P26010 798 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 NUDT1P36639 197 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 SOX3P41225 446 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 KIR2DL3P43628 341 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 CRISP1P54107 249 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 SNRPGP62308 76 aaKnown RBP13.93□□□□□ -0.18
PRKN-204ENST00000366896 TARDBPQ13148 414 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRKN-204ENST00000366896 TMEM201Q5SNT2 666 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 TRIM48Q8IWZ4 208 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 SLC38A6Q8IZM9 456 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 SIX5Q8N196 739 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 YIPF7Q8N8F6 280 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 GDPD1Q8N9F7 314 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 SPERTQ8NA61 448 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 STUB1Q9UNE7 303 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 KIAA1549LQ6ZVL6 1849 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 TBX19O60806 448 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 ADAP00813 363 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 M6PRP20645 277 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 CHI3L1P36222 383 aaPredicted RBP13.93□□□□□ -0.18
PRKN-204ENST00000366896 SLC6A11P48066 632 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 TGM4P49221 684 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 DGKGP49619 791 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 C2orf80Q0P641 193 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 FAM214AQ32MH5 1076 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 MEDAGQ5VYS4 303 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 TMEM220Q6QAJ8 160 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 PTCHD4Q6ZW05 846 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 TRIM69Q86WT6 500 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 IL17RCQ8NAC3 791 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 TP53I13Q8NBR0 393 aaPredicted RBP13.93□□□□□ -0.18
PRKN-204ENST00000366896 FAM46DQ8NEK8 389 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 APOBEC4Q8WW27 367 aaKnown RBP13.93□□□□□ -0.18
PRKN-204ENST00000366896 PDXPQ96GD0 296 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 WRAP53Q9BUR4 548 aaKnown RBP13.93□□□□□ -0.18
PRKN-204ENST00000366896 MIXL1Q9H2W2 232 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 NIPAL2Q9H841 368 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 SLC25A19Q9HC21 320 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 PRDM6Q9NQX0 595 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 DIABLOQ9NR28 239 aa13.93□□□□□ -0.18
PRKN-204ENST00000366896 PIPSLA2A3N6 862 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 HYKKA2RU49 373 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 C12orf71A8MTZ7 269 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 ARHGEF9O43307 516 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 IFNW1P05000 195 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 IL9P15248 144 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 UQCRC2P22695 453 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 CPN2P22792 545 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 CSTF2P33240 577 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRKN-204ENST00000366896 GJA4P35212 333 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 SOAT1P35610 550 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 TAS2R50P59544 299 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 HOXC5Q00444 222 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 TFF2Q03403 129 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 SAXO2Q658L1 398 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 KLHL17Q6TDP4 642 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 ZNF366Q8N895 744 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 AQP11Q8NBQ7 271 aa13.92□□□□□ -0.18
PRKN-204ENST00000366896 MAFAQ8NHW3 353 aaPredicted RBP13.92□□□□□ -0.18
PRKN-204ENST00000366896 CHFRQ96EP1 664 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms