RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 KLF5Q13887 457 aaPredicted RBP3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 CAPRIN1Q14444 709 aaKnown RBP3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 KIAA0040Q15053 153 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 ISXQ2M1V0 245 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 PAN3Q58A45 887 aaKnown RBP3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 RHBDD2Q6NTF9 364 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 RAPH1Q70E73 1250 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 MOB2Q70IA6 237 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 LUZP1Q86V48 1076 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 STHQ8IWL8 128 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 Q8N9G6 341 aaPredicted RBP3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 OR6M1Q8NGM8 313 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 FIBINQ8TAL6 211 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 ZNF564Q8TBZ8 553 aaPredicted RBP3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 GLYATL1Q969I3 302 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 DCTPP1Q9H773 170 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 ABCB8Q9NUT2 735 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 DNAJC11Q9NVH1 559 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 AFF2P51816 1311 aa3.13□□□□□ -1.91
RNU4-28P-201ENST00000364739 A0A0U1RQK1 487 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 ZNF320A2RRD8 509 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 SH2D1BO14796 132 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 DUSP14O95147 198 aaKnown RBP3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 GJB5O95377 273 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 NUDT14O95848 222 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 FCER2P06734 321 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 MMP10P09238 476 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 CYP3A5P20815 502 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 STIP1P31948 543 aaKnown RBP3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 SNU13P55769 128 aaKnown RBP3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 NME5P56597 212 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 STX17P56962 302 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 TYSND1Q2T9J0 566 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 MPPE1Q53F39 396 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 ZNF789Q5FWF6 425 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 MS4A13Q5J8X5 152 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 HECTD3Q5T447 861 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 TAF3Q5VWG9 929 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 CD164L2Q6UWJ8 174 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 PIWIL3Q7Z3Z3 882 aaKnown RBP3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 UNC5CLQ8IV45 518 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 CEND1Q8N111 149 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 U2AF1L4Q8WU68 220 aaKnown RBP3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 OSBPL8Q9BZF1 889 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 DCLRE1BQ9H816 532 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 NRN1Q9NPD7 142 aa3.12□□□□□ -1.91
RNU4-28P-201ENST00000364739 H0Y626 953 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 PSMA7O14818 248 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 SLC7A4O43246 635 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 STX6O43752 255 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 LYPD3O95274 346 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 TGDSO95455 350 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 WNT2P09544 360 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 PVRP15151 417 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 PRKAR2BP31323 418 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 TCF7P36402 384 aaPredicted RBP3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 ARHGDIBP52566 201 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 GEMP55040 296 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 ERVPABLB-1P60509 514 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 ASAH1Q13510 395 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 KRT31Q15323 416 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 STXBP2Q15833 593 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 DDI2Q5TDH0 399 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 GPR142Q7Z601 462 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 RNASE8Q8TDE3 154 aaKnown RBP3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 JAKMIP1Q96N16 626 aaKnown RBP3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 PRAM1Q96QH2 718 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 OR5M11Q96RB7 305 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 SPAG8Q99932 426 aaPredicted RBP3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 DESI2Q9BSY9 194 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 ZWILCHQ9H900 591 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 MAGEF1Q9HAY2 307 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 RAI14Q9P0K7 980 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 EMCNQ9ULC0 261 aa3.11□□□□□ -1.91
RNU4-28P-201ENST00000364739 A0A0A6YYD4 124 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 CENPBP07199 599 aaPredicted RBP3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 ALPIP09923 528 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 UROSP10746 265 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 ELK1P19419 428 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 CTNNB1P35222 781 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 SAA4P35542 130 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 ZNF131P52739 623 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 VCPP55072 806 aaKnown RBP3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 RAG2P55895 527 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 HAND2P61296 217 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 ZNF33BQ06732 778 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 RCN2Q14257 317 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 IFI44LQ53G44 452 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 FAM133BQ5BKY9 247 aaKnown RBP3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 C2orf66Q6UXQ4 117 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 ZNF677Q86XU0 584 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 NAT8LQ8N9F0 302 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 SIDT2Q8NBJ9 832 aaKnown RBP3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 OR4A16Q8NH70 328 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 GPR174Q9BXC1 333 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 GANQ9H2C0 597 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 MMADHCQ9H3L0 296 aaPredicted RBP3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 ESM1Q9NQ30 184 aa3.1□□□□□ -1.91
RNU4-28P-201ENST00000364739 KLRF1Q9NZS2 232 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms