RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PTX3P26022 381 aaPredicted RBP19.29■□□□□ 0.68
CD47-202ENST00000361309 HOXC12P31275 282 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 OPRM1P35372 400 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 BSGP35613 385 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 SORDQ00796 357 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 WIPI1Q5MNZ9 446 aaPredicted RBP19.29■□□□□ 0.68
CD47-202ENST00000361309 CYP20A1Q6UW02 462 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 CMC1Q7Z7K0 106 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 MBD3L2Q8NHZ7 208 aaPredicted RBP19.29■□□□□ 0.68
CD47-202ENST00000361309 ABTB1Q969K4 478 aaPredicted RBP19.29■□□□□ 0.68
CD47-202ENST00000361309 SECISBP2Q96T21 854 aaKnown RBP19.29■□□□□ 0.68
CD47-202ENST00000361309 DDX31Q9H8H2 851 aaKnown RBP19.29■□□□□ 0.68
CD47-202ENST00000361309 WDR41Q9HAD4 459 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 NMRAL1Q9HBL8 299 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 JKAMPQ9P055 326 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 TSC22D4Q9Y3Q8 395 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 ANGPTL3Q9Y5C1 460 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 PCDHGA11Q9Y5H2 935 aa19.29■□□□□ 0.68
CD47-202ENST00000361309 CLCA1A8K7I4 914 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 CT62P0C5K7 136 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 SPRP35270 261 aaPredicted RBP19.28■□□□□ 0.68
CD47-202ENST00000361309 CASP3P42574 277 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 TMED10P49755 219 aaKnown RBP19.28■□□□□ 0.68
CD47-202ENST00000361309 LIPJQ5W064 366 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 TBC1D1Q86TI0 1168 aaPredicted RBP19.28■□□□□ 0.68
CD47-202ENST00000361309 CTAGE3PQ8IX95 158 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 PRR22Q8IZ63 422 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 C9orf106Q8NAJ2 232 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 ADIPOR1Q96A54 375 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 C18orf12Q96KH6 178 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 YIPF4Q9BSR8 244 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 ACTR8Q9H981 624 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 CALHM2Q9HA72 323 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 CXorf21Q9HAI6 301 aa19.28■□□□□ 0.68
CD47-202ENST00000361309 DNHD1Q96M86 4753 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 CCDC188H7C350 402 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 GNB5O14775 395 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 PGRMC2O15173 223 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 IL18BPO95998 194 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 GBAP04062 536 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 LTA4HP09960 611 aaKnown RBP19.27■□□□□ 0.68
CD47-202ENST00000361309 MTHFD2P13995 350 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 NAGLUP54802 743 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 NRG3P56975 720 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 DCAF7P61962 342 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 RPP38P78345 283 aaKnown RBP19.27■□□□□ 0.68
CD47-202ENST00000361309 PHEXP78562 749 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 MRPS25P82663 173 aaKnown RBP19.27■□□□□ 0.68
CD47-202ENST00000361309 SLMAPQ14BN4 828 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 SETDB1Q15047 1291 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 POU4F3Q15319 338 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 GRTP1Q5TC63 336 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 C3orf62Q6ZUJ4 267 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 CYS1Q717R9 158 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 GALNT12Q8IXK2 581 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 ZNF615Q8N8J6 731 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 TMEM41AQ96HV5 264 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 OR10A5Q9H207 317 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 NEUROD4Q9HD90 331 aa19.27■□□□□ 0.68
CD47-202ENST00000361309 H0YIV9 168 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 GOSR1O95249 250 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 TMIGD3P0DMS9 266 aaPredicted RBP19.26■□□□□ 0.67
CD47-202ENST00000361309 CD53P19397 219 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 PIK3R1P27986 724 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 PTPN6P29350 595 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 ADSLP30566 484 aaPredicted RBP19.26■□□□□ 0.67
CD47-202ENST00000361309 SOX18P35713 384 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 GPX6P59796 221 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 FUT7Q11130 342 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 CUL3Q13618 768 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 RCAN2Q14206 197 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 CPSF6Q16630 551 aaKnown RBP eCLIP19.26■□□□□ 0.67
CD47-202ENST00000361309 TIGD3Q6B0B8 471 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 OR52E8Q6IFG1 317 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 YRDCQ86U90 279 aaKnown RBP19.26■□□□□ 0.67
CD47-202ENST00000361309 KRTAP1-3Q8IUG1 177 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 FAM83FQ8NEG4 500 aaPredicted RBP19.26■□□□□ 0.67
CD47-202ENST00000361309 NXNL1Q96CM4 212 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 NTNG2Q96CW9 530 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 REPS1Q96D71 796 aa19.26■□□□□ 0.67
CD47-202ENST00000361309 FN1P02751 2386 aaKnown RBP19.26■□□□□ 0.67
CD47-202ENST00000361309 JMJD1CQ15652 2540 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 LRRC14BA6NHZ5 514 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 EIF3HO15372 352 aaKnown RBP eCLIP19.25■□□□□ 0.67
CD47-202ENST00000361309 ERN1O75460 977 aaKnown RBP19.25■□□□□ 0.67
CD47-202ENST00000361309 HRGP04196 525 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 INHBBP09529 407 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 ABCD3P28288 659 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 CRABP2P29373 138 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 SLCO1A2P46721 670 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 FOXF2Q12947 444 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 PCBP2Q15366 365 aaKnown RBP eCLIP19.25■□□□□ 0.67
CD47-202ENST00000361309 NUDT13Q86X67 352 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 PPM1NQ8N819 430 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 OR1J4Q8NGS1 313 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 ZPLD1Q8TCW7 415 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 RBM24Q9BX46 236 aaKnown RBP19.25■□□□□ 0.67
CD47-202ENST00000361309 DPH5Q9H2P9 285 aa19.25■□□□□ 0.67
CD47-202ENST00000361309 A0A1W2PPR1 153 aa19.24■□□□□ 0.67
CD47-202ENST00000361309 SYCE1LA8MT33 242 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms