RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 VSX2P58304 361 aaPredicted RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 RTL6Q6ICC9 239 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 INTS5Q6P9B9 1019 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 ATE1O95260 518 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 RFC2P35250 354 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 LASP1Q14847 261 aaKnown RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 NIPAL3Q6P499 406 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 NAT8LQ8N9F0 302 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 HMCESQ96FZ2 354 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 FAM230AA0A1W2PPH8 454 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 OR1E2P47887 323 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 CCINQ13939 588 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 UNC5DQ6UXZ4 953 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 GDPD4Q6W3E5 623 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 NLGN2Q8NFZ4 835 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC35F5Q8WV83 523 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 DLDP09622 509 aaKnown RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 PEA15Q15121 130 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 SPHARQ15513 63 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 TMPRSS9Q7Z410 1059 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 ABHD11Q8NFV4 315 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 SPTSSAQ969W0 71 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 BTBD2Q9BX70 525 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 PLCXD1Q9NUJ7 323 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 GLTPQ9NZD2 209 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 ARID1AO14497 2285 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 CXorf49A8MYA2 514 aaPredicted RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 TGFB1P01137 390 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 EDNRBP24530 442 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 LEPRP48357 1165 aaKnown RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 UBE2NP61088 152 aaKnown RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 MBLAC2Q68D91 279 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 DCUN1D3Q8IWE4 304 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 FAM83FQ8NEG4 500 aaPredicted RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 OR1J4Q8NGS1 313 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 AMDHD1Q96NU7 426 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 H3BMQ9 156 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC1A7O00341 560 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 TGFB1I1O43294 461 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 ADH5P11766 374 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF43P17038 809 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 MYF6P23409 242 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 ABHD18Q0P651 414 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 REEP3Q6NUK4 255 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 COG8Q96MW5 612 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 TGM7Q96PF1 710 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 CARS2Q9HA77 564 aaKnown RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 OTOFQ9HC10 1997 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 SIRPGQ9P1W8 387 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 NDRG2Q9UN36 371 aaKnown RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 FBXO7Q9Y3I1 522 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 BHLHE40O14503 412 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 ARHGEF15O94989 841 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 KLK1P06870 262 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 RAB28P51157 221 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 CXCL9Q07325 125 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF630Q2M218 657 aaPredicted RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF648Q5T619 568 aaPredicted RBP12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 KCTD20Q7Z5Y7 419 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 HS6ST2Q96MM7 605 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 ANKMY1Q9P2S6 941 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 NUBP2Q9Y5Y2 271 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 MYO7AQ13402 2215 aa12.66□□□□□ -0.38
SRGAP3-201ENST00000360413 TOR1AO14656 332 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC22A5O76082 557 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 PRKCGP05129 697 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 CCL23P55773 120 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 PTCHD3Q3KNS1 767 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 TANGO2Q6ICL3 276 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 PGAP1Q75T13 922 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 TRAPPC6BQ86SZ2 158 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 IRF2BP1Q8IU81 584 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 NPLOC4Q8TAT6 608 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 PHOSPHO1Q8TCT1 267 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 HMGB4Q8WW32 186 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 EPHA6Q9UF33 1036 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 KIF25Q9UIL4 384 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 DCCP43146 1447 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 CPQQ9Y646 472 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 RNF215Q9Y6U7 377 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF850A8MQ14 1090 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 G6PDP11413 515 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 IL17RCQ8NAC3 791 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 ZBED3Q96IU2 234 aaPredicted RBP12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 DIP2BQ9P265 1576 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 STSP08842 583 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 CCNJQ5T5M9 372 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 SPRYD4Q8WW59 207 aaPredicted RBP12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 RSC1A1Q92681 617 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 MED30Q96HR3 178 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 UFSP2Q9NUQ7 469 aa12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 DHPSP49366 369 aaPredicted RBP12.65□□□□□ -0.38
SRGAP3-201ENST00000360413 TAGLNQ01995 201 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms